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Development and evaluation of a multiplex real-time PCR (qPCR) assay targeting ttrRSBCA locus and invA gene for accurate detection
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Quantitative multiplex assay for simultaneous detection of the Indiana serotype of vesicular stomatitis virus and HIV gag
John W. Coleman, Eleanor Ogin-Wilson, J. Erik Johnson, Farooq Nasar, Timothy P. Zamb, David K. Clarke, R. Michael Hendry,
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Nucleic Acids Research
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Identification and validation of reference genes for gene expression studies in postharvest rose flower (Rosa hybrida)
Yonglu Meng, Na Li, Ji Tian, Junping Gao, and Changqing Zhang
Scientia Horticulturae
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Real-Time Reverse Transcription Polymerase Chain Reaction to Measure mRNA: Use, Limitations, and Presentation of Results
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The Anatomical Record: Advances in Integrative Anatomy and Evolutionary Biology
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Recent advances and developments in monitoring biological agents in water samples
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Insulin-like growth factor-I cDNA cloning, gene expression and potential use as a growth rate indicator in Nile tilapia, Oreochromis
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Emmanuel M. Vera Cruz, Christopher L. Brown, J. Adam Luckenbach, Matthew E. Picha, Remedios B. Bolivar, and Russell J. Borski
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cDNA Array Analysis of Cytokines, Chemokines, and Receptors Involved in the Development of TNBS-Induced Colitis: Homeostatic
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Catalina Abad, Yasmina Juarranz, Carmen Martinez, Alicia Arranz, Florencia Rosignoli, María García-Gómez, Javier Leceta, and
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Analysis of multiple exon-skipping mRNA splice variants using SYBR Green real-time RT-PCR
Heather S. Walton, Florian M. Gebhardt, David J. Innes, and Peter R. Dodd
Journal of Neuroscience Methods
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Assessment of normalization strategies for quantitative RT-PCR using microdissected tissue samples
Heidi S Erickson, Paul S Albert, John W Gillespie, Benjamin S Wallis, Jaime Rodriguez-Canales, W Marston Linehan, Sergio Gonzalez,
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Laboratory Investigation
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Digital PCR provides absolute quantitation of viral load for an occult RNA virus
Richard Allen White, Stephen R. Quake, and Kenneth Curr
Journal of Virological Methods
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Putative virulence genes in Moritella viscosa: Activity during in vitro inoculation and in vivo infection
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Evaluation of reference genes for real-time PCR quantification of gene expression in the Australian sheep blowfly, Lucilia
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N. H. BAGNALL and A. C. KOTZE
Medical and Veterinary Entomology
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Pathological staging and therapy of oesophageal and gastric cancer
Philip R Debruyne, Scott A Waldman, and Stephanie Schulz
Expert Opinion on Pharmacotherapy
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Developmental gene expression profiling of mammalian, fetal orofacial tissue
Partha Mukhopadhyay, Robert M. Greene, Wolfgang Zacharias, Martin C. Weinrich, Saurabh Singh, William W. Young, and M. Michele
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Comparison of the time courses of selective gene expression and dopaminergic depletion induced by MPP+ in MN9D cells
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Neurochemistry International
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Measurement of PTHrP, PTHR1, and CaSR Expression Levels in Tissues of Sea Bream (Sparus aurata) Using Quantitative PCR
X M HANG, D POWER, G FLIK, and R J BALMENT
Annals of the New York Academy of Sciences
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Validation of Putative Reference Genes for Normalization of Q-RT-PCR Data From Paraffin-embedded Lymphoid Tissue
Tina Marie Green, Karin de Stricker, and Michael Boe Møller
Diagnostic Molecular Pathology
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Expression of the Ca2+-Activated Chloride Channel GenesCLCA1andCLCA2Is Downregulated in Human Colorectal Cancer
Stephen A. Bustin, Shu-Rui Li, and Sina Dorudi
DNA and Cell Biology
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Evaluation of candidate reference genes for gene expression studies in Cymbidium kanran
Huolin Luo, Kecan Luo, Liping Luo, En xiang Li, Bicai Guan, Dongjin Xiong, Baoten Sun, Kou Peng, and Boyun Yang
Scientia Horticulturae
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Determination of reference microRNAs for relative quantification in grass carp (Ctenopharyngodon idella)
Xiao-Yan Xu, Yu-Bang Shen, Jian-Jun Fu, Li-Qun Lu, and Jia-Le Li
Fish & Shellfish Immunology
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CCR6/CCL20 Chemokine Expression Profile in Distinct Colorectal Malignancies
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Scandinavian Journal of Immunology
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On non-detects in qPCR data
M. N. McCall, H. R. McMurray, H. Land, and A. Almudevar
Bioinformatics
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Methionine and threonine synthesis are limited by homoserine availability and not the activity of homoserine kinase in Arabidopsis
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Minsang Lee, Melinda N. Martin, Andre’ O. Hudson, Jiyeon Lee, Michael J. Muhitch, and Thomas Leustek
The Plant Journal
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Epidermal Growth Factor Reduces Hepatic Sequelae in Experimental Necrotizing Enterocolitis
Melissa D. Halpern, Hana Holubec, Jessica A. Clark, Tara A. Saunders, Catherine S. Williams, Katerina Dvorak, and Bohuslav
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Biology of the Neonate
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Functional Characterization of an Aldehyde Dehydrogenase Homologue in Rice
Sheng-hui YANG, Xiang-li NIU, Di LUO, Chang-dong CHEN, Xu YU, Wei TANG, Bao-rong LU, and Yong-sheng LIU
Journal of Integrative Agriculture
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11 :1434
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Safeners coordinately induce the expression of multiple proteins and MRP transcripts involved in herbicide metabolism and
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Qin Zhang, Fangxiu Xu, Kris N. Lambert, and Dean E. Riechers
PROTEOMICS
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First molecular evidence of diatom effects in the copepod Calanus helgolandicus
Chiara Lauritano, Marco Borra, Ylenia Carotenuto, Elio Biffali, Antonio Miralto, Gabriele Procaccini, and Adrianna Ianora
Journal of Experimental Marine Biology and Ecology
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404 :79
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Validation of reference genes in human testis and ejaculate
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Andrologia
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The antioxidant activity of chondroitin-4-sulphate, in carbon tetrachloride-induced acute hepatitis in mice, involves NF-κB
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G M Campo, A Avenoso, S Campo, G Nastasi, P Traina, A D'Ascola, C A Rugolo, and A Calatroni
British Journal of Pharmacology
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155 :945
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Impact of in vitro production techniques on the expression of X-linked genes in bovine (bos taurus) oocytes and pre-attachment
embryos
Maria I. Nino-Soto, Parvathi K. Basrur, and W. Allan King
Molecular Reproduction and Development
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74 :144
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Quantification of PCR products by phosphate measurement
Borros Arneth
Analytical Biochemistry
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384 :305
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Evidence for dissociation of TLR mRNA expression and TLR agonist-mediated functions in bovine macrophages
Marco Franchini, Matthias Schweizer, Philippe Mätzener, Ioannis Magkouras, Kay-Sara Sauter, Jelena Mirkovitch, Ernst Peterhans,
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Veterinary Immunology and Immunopathology
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110 :37
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Assessment of the use of RNA quality metrics for the screening of articular cartilage specimens from clinically normal dogs
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Dylan N. Clements, Anne Vaughan-Thomas, Siriporn Peansukmanee, Stuart D. Carter, John F. Innes, William E. R. Ollier, and
Peter D. Clegg
American Journal of Veterinary Research
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67 :1438
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β-Tubulin Is a More Suitable Internal Control thanβ-Actin in Western Blot Analysis of Spinal Cord Tissues after Traumatic
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Nai-Kui Liu and Xiao-Ming Xu
Journal of Neurotrauma
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23 :1794
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Validation of endogenous control reference genes for normalizing gene expression studies in endometrial carcinoma
Thangesweran Ayakannu, Anthony H. Taylor, Jonathon M. Willets, Laurence Brown, David G. Lambert, John McDonald, Quentin Davies,
Esther L. Moss, and Justin C. Konje
Molecular Human Reproduction
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Comparison of two RT-PCR methods for quantifyingampCspecific transcripts inEscherichia colistrains
Stéphane Corvec, Nathalie Caroff, Eric Espaze, Julie Marraillac, Henri Drugeon, and Alain Reynaud
FEMS Microbiology Letters
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228 :187
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Molecular Cloning of Myostatin Gene and Characterization of Tissue-Specific and Developmental Stage-Specific Expression of
the Gene in Orange Spotted Grouper, Epinephelus coioides
Chi-Fong Ko, Tzu-Ting Chiou, Thomas T. Chen, Jen-Leih Wu, Jiann-Chu Chen, and Jenn-Kan Lu
Marine Biotechnology
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9 :20
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Strain-specific modifier genes governing craniofacial phenotypes
Partha Mukhopadhyay, Guy Brock, Cynthia Webb, M. Michele Pisano, and Robert M. Greene
Birth Defects Research Part A: Clinical and Molecular Teratology
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94 :162
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Cytochromes P450 and MDR1 mRNA expression along the human gastrointestinal tract
Mari Thorn, Niklas Finnstrom, Stefan Lundgren, Anders Rane, and Lars Loof
British Journal of Clinical Pharmacology
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60 :54
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Successful RNA extraction from various human postmortem tissues
Marielle Heinrich, Katja Matt, Sabine Lutz-Bonengel, and Ulrike Schmidt
International Journal of Legal Medicine
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121 :136
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Cloning, identification and accurate normalization expression analysis of PPARα gene by GeNorm in Megalobrama amblycephala
Yuhua Zhao, Yasmeen Gul, Su Li, and Weimin Wang
Fish & Shellfish Immunology
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31 :462
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The Effect of the JAK Inhibitor CP-690,550 on Peripheral Immune Parameters in Stable Kidney Allograft Patients
Evelien A. F. J. van Gurp, Wenda Schoordijk-Verschoor, Mariska Klepper, Sander S. Korevaar, Gary Chan, Willem Weimar, and
Carla C. Baan
Transplantation
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87 :79
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Development and preliminary application of an immunochromatographic strip for rapid detection of infection with porcine reproductive
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Xue-song Li, Fang Fu, Yue-kun Lang, Hai-zhong Li, Wei Wang, Xin Chen, Hua-bin Tian, Yan-jun Zhou, Guang-zhi Tong, and Xi Li
Journal of Virological Methods
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176 :46
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Reference genes identified in SH-SY5Y cells using custom-made gene arrays with validation by quantitative polymerase chain
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Frédéric J. Hoerndli, Marco Toigo, Andreas Schild, Jürgen Götz, and Philip J. Day
Analytical Biochemistry
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335 :30
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Strategies to improve low copy transgenic events in Agrobacterium-mediated transformation of maize
Elumalai Sivamani, Xianggan Li, Samson Nalapalli, Yoshimi Barron, Anna Prairie, David Bradley, Michele Doyle, and Qiudeng
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Transgenic Research
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Development of diagnostics for aquaculture: challenges and opportunities
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Aquaculture Research
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DROUGHT STRESS: Role of Carbohydrate Metabolism in Drought-Induced Male Sterility in Rice Anthers*
G. N. Nguyen, D. L. Hailstones, M. Wilkes, and B. G. Sutton
Journal of Agronomy and Crop Science
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196 :346
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Glutamate receptor subunit expression in the rhesus macaque locus coeruleus
Nigel C. Noriega, Vasilios T. Garyfallou, Steven G. Kohama, and Henryk F. Urbanski
Brain Research
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Roles of receptor for activated protein kinase C1 for modulating immune responses in white shrimp Litopenaeus vannamei
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Fish & Shellfish Immunology
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46 :753
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N-Glycosylation of Gel1 or Gel2 is vital for cell wall -glucan synthesis in Aspergillus fumigatus
W. Zhao, Y. Lu, H. Ouyang, H. Zhou, J. Yan, T. Du, and C. Jin
Glycobiology
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23 :955
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Towards Quantitative mRNA Analysis in Paraffin-Embedded Tissues Using Real-Time Reverse Transcriptase-Polymerase Chain Reaction
Helene Nortvig Abrahamsen, Torben Steiniche, Ebba Nexo, Stephen J. Hamilton-Dutoit, and Boe Sandahl Sorensen
The Journal of Molecular Diagnostics
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5 :34
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Short-term overcrowding of Atlantic cod, Gadus morhua: Effects on serum-mediated antibacterial activity and transcription
of glucose transport and antioxidant defense related genes
Christopher Marlowe A. Caipang, Monica F. Brinchmann, and Viswanath Kiron
Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology
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151 :560
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Moult cycle-related changes in biological activity of moult-inhibiting hormone (MIH) and crustacean hyperglycaemic hormone
(CHH) in the crab, Carcinus maenas. From target to transcript
J. Sook Chung and Simon G. Webster
European Journal of Biochemistry
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270 :3280
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Validation of a Novel Ultra-Short Immunolabeling Method for High-Quality mRNA Preservation in Laser Microdissection and Real-Time
Reverse Transcriptase-Polymerase Chain Reaction
Dorthevon Smolinski, Maike Blessenohl, Carsten Neubauer, Kathrin Kalies, and Andreas Gebert
The Journal of Molecular Diagnostics
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Evaluation of potential internal references for quantitative real-time RT-PCR normalization of gene expression in red drum
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Bo-guang Sun and Yong-hua Hu
Fish Physiology and Biochemistry
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41 :695
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Application of game theory to the interaction between plant viruses during mixed infections
S. Martin and S. F. Elena
Journal of General Virology
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Selection of reference genes for quantitative polymerase chain reaction studies in purified B cells from B cell chronic lymphocytic
leukaemia patients
Vilma Valceckiene, Rima Kontenyte, Arturas Jakubauskas, and Laimonas Griskevicius
British Journal of Haematology
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151 :232
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Expression profile of immune-related genes in Lates calcarifer infected by Cryptocaryon irritans
Norashikin Mohd-Shaharuddin, Adura Mohd-Adnan, Beng-Chu Kua, and Sheila Nathan
Fish & Shellfish Immunology
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34 :762
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Quantitative assay for measuring the Taura syndrome virus and yellow head virus load in shrimp by real-time RT-PCR using SYBR
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Arun K. Dhar, Michelle M. Roux, and Kurt R. Klimpel
Journal of Virological Methods
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104 :69
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Expression of glutamate transporter, GABRA6, serine proteinase inhibitor 2 and low levels of glutamate and GABA in the brain
of knock-out mouse for Canavan disease
Sankar Surendran, Peter L. Rady, Kimberlee Michals-Matalon, Michael J. Quast, David K. Rassin, Gerald A. Campbell, Ed L. Ezell,
Jingna Wei, Stephen K. Tyring, Sylvia Szucs, and Reuben Matalon
Brain Research Bulletin
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Ultrafine Carbon Black Particles Inhibit Human Lung Fibroblast-Mediated Collagen Gel Contraction
Huijung Kim, Xiangde Liu, Tetsu Kobayashi, Tadashi Kohyama, Fu-Qiang Wen, Debra J. Romberger, Heather Conner, Peter S. Gilmour,
Kenneth Donaldson, William MacNee, and Stephen I. Rennard
American Journal of Respiratory Cell and Molecular Biology
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28 :111
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Synergy between Cucumber Mosaic Virus and Zucchini Yellow Mosaic Virus on Cucurbitaceae Hosts Tested by Real-time Reverse
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Rong ZENG, Qiansheng LIAO, Junli FENG, Dingjun LI, and Jishuang CHEN
Acta Biochimica et Biophysica Sinica
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Quantification of RNA in bacteriophage MS2-like viruses in solution by small-angle X-ray scattering
Deborah A. Kuzmanovic, Ilya Elashvili, Charles Wick, Catherine O’Connell, and Susan Krueger
Radiation Physics and Chemistry
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Ephrin-Bs Drive Junctional Downregulation and Actin Stress Fiber Disassembly to Enable Wound Re-epithelialization
Robert Nunan, Jessica Campbell, Ryoichi Mori, Mara E. Pitulescu, Wen G. Jiang, Keith G. Harding, Ralf H. Adams, Catherine D.
Nobes, and Paul Martin
Cell Reports
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Critical appraisal of quantitative PCR results in colorectal cancer research: Can we rely on published qPCR results?
J.R. Dijkstra, L.C. van Kempen, I.D. Nagtegaal, and S.A. Bustin
Molecular Oncology
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Material properties and bone marrow stromal cells response toIn situ crosslinkable RGD-functionlized lactide-co-glycolide
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Esmaiel Jabbari, Xuezhong He, Mani T. Valarmathi, Alireza S. Sarvestani, and Weijie Xu
Journal of Biomedical Materials Research Part A
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Anthocyanin accumulation and changes in CHS and PR-5 gene expression in Arabidopsis thaliana after removal of the inflorescence
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Shaoshan Li and Åke Strid
Plant Physiology and Biochemistry
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43 :521
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Transition from ectothermy to endothermy: the development of metabolic capacity in a bird (Gallus gallus)
F. Seebacher, T. S Schwartz, and M. B Thompson
Proceedings of the Royal Society B: Biological Sciences
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The pregenome/C RNA of duck hepatitis B virus is not used for translation of core protein during the early phase of infection
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Determination of protein and RNA expression levels of common housekeeping genes in a mouse model of neurodegeneration
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A ribozyme that triphosphorylates RNA 5'-hydroxyl groups
J. E. Moretti and U. F. Muller
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Quantification of mRNA using real-time RT-PCR
Tania Nolan, Rebecca E Hands, and Stephen A Bustin
Nature Protocols
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Bayesian modeling of reproducibility and robustness of RNA reverse transcription and quantitative real-time polymerase chain
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Jere Lindén, Jukka Ranta, and Raimo Pohjanvirta
Analytical Biochemistry
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Real-time PCR: what relevance to plant studies?
C. Gachon, A. Mingam, and B. Charrier
Journal of Experimental Botany
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Compensated Overexpression of Procollagens α1(I) and α1(III) Following Perilla Mint Ketone-induced Acute Pulmonary Damage
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S.-M. Schmidbauer, M. Venner, G. von Samson-Himmelstjerna, W. Drommer, and A.D. Gruber
Journal of Comparative Pathology
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131 :186
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Selection of normalization factors for quantitative real time RT-PCR studies in Japanese flounder (Paralichthys olivaceus)
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Jian Zhang, Yong-hua Hu, Bo-guang Sun, Zhi-zhong Xiao, and Li Sun
Veterinary Immunology and Immunopathology
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Biological characterization of oxidized hyaluronic acid/resveratrol hydrogel for cartilage tissue engineering
Shiow-Yunn Sheu, Wen-Shan Chen, Jui-Sheng Sun, Feng-Huei Lin, and Tuoh Wu
Journal of Biomedical Materials Research Part A
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Determination of cryIAb and cryIAc Copy Number in Transgenic Basmati 370 Rice (Oryza sativa L.) Plants Using Real-time PCR
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Anwaar Ahmad ., Shahina Bano Maqbool ., Syed Anwar Hashsham ., and Mariam B. Sticklen .
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5 :283
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Ostreid herpes virus 1 infection in families of the Pacific oyster, Crassostrea gigas, during a summer mortality outbreak:
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Virus Research
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Human papillomavirus is a favourable prognostic factor in tonsillar cancer and its oncogenic role is supported by the expression
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David Lindquist, Mircea Romanitan, Lalle Hammarstedt, Anders Näsman, Hanna Dahlstrand, Johan Lindholm, Liselotte Onelöv, Torbjörn
Ramqvist, Weimin Ye, Eva Munck-Wikland, and Tina Dalianis
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Influence of wine fermentation temperature on the synthesis of yeast-derived volatile aroma compounds
Ana M. Molina, Jan H. Swiegers, Cristian Varela, Isak S. Pretorius, and Eduardo Agosin
Applied Microbiology and Biotechnology
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There is no correlation between glucocorticoid receptor mRNA expression and protein binding in the brains of house sparrows
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General and Comparative Endocrinology
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mRNA profiling in forensic genetics I: Possibilities and limitations
Marielle Vennemann and Antje Koppelkamm
Forensic Science International
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Synthesis and evaluation of a new non-fluorescent quencher in fluorogenic oligonucleotide probes for real-time PCR
Jonathan P. May, Lynda J. Brown, Ian van Delft, Nicola Thelwell, Kate Harley, and Tom Brown
Organic & Biomolecular Chemistry
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Alternative splicing and nonsense-mediated decay of circadian clock genes under environmental stress conditions in Arabidopsis
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BMC Plant Biology
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Paclitaxel acts as an adjuvant to promote both Th1 and Th2 immune responses induced by ovalbumin in mice
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Vaccine
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Parabolic Flight Induces Changes in Gene Expression Patterns inArabidopsis thaliana
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Astrobiology
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Up-regulation of CYP expression in hepatoma cells stably transfected by chimeric nuclear receptors
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European Journal of Pharmaceutical Sciences
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Application of a customized pathway-focused microarray for gene expression profiling of cellular homeostasis upon exposure
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TRAIL protects against endothelium injury in diabetes via Akt-eNOS signaling
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Selection and Validation of Reference Genes for Functional Studies in the Calliphoridae Family
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Validation of reference genes for RT-qPCR normalization in common bean during biotic and abiotic stresses
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Glucocorticoids co-interact with lipoxin A4 via lipoxin A4 receptor (ALX) up-regulation
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The American Journal of Pathology
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Ionotropic glutamate receptor mRNA expression in the human thalamus: Absence of change in schizophrenia
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Investigation of Mercury Methylation Pathways in Biofilm versus Planktonic Cultures ofDesulfovibrio desulfuricans
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Environmental Science & Technology
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The Systemic and Local Acute Phase Response Following Acute Brain Injury
David C. Wilcockson, Sandra J. Campbell, Daniel C. Anthony, and V. Hugh Perry
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Selection of appropriate reference genes for gene expression studies by quantitative real-time polymerase chain reaction in
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Estrogenic regulation of gene and protein expression within the amygdala of female mice
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A Comparison Between Northern Blotting and Quantitative Real-Time PCR as a Means of Detecting the Nutritional Regulation of
Genes Expressed in Roots of Arabidopsis thaliana
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Evaluation of the Abelson gene as a control gene for real-time quantitative PCR in multiple myeloma
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Changes in CXCL12/CXCR4-chemokine expression during onset of colorectal malignancies
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Regulation of arginine transport and metabolism by Protein Kinase Cα in endothelial cells: stimulation of CAT2 transporters
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Lactoferrin enhanced efficacy of the BCG vaccine to generate host protective responses against challenge with virulent Mycobacterium
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Altered expression of novel genes in the cerebral cortex following experimental brain injury
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Differences in cytokine synthesis by the sub-populations of dendritic cells from afferent lymph
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Harnessing the power of gene microarrays for the study of brain aging and Alzheimer's disease: Statistical reliability and
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Changes in Expression of Apoptosis-Related Genes Are Linked to the Molecular Response to Imatinib Treatment in Chronic-Phase
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Expression of clottable protein of tiger shrimp (Penaeus monodon) in gonads and its possible role as nutrient source for the
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Stable transduction of bovine TLR4 and bovine MD-2 into LPS-nonresponsive cells and soluble CD14 promote the ability to respond
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Validation of Zebrafish (Danio rerio) Reference Genes for Quantitative Real-time RT-PCR Normalization
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Comparison between Real-Time PCR and Agarose Gel Electrophoresis for DNA Quantification
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A method for correcting standard-based real-time PCR DNA quantitation when the standard’s polymerase reaction efficiency is
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Increased chondrocyte sclerostin may protect against cartilage degradation in osteoarthritis
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mRNA expression of antioxidant enzymes (SOD, CAT and GSH-Px) and lipid peroxidative stress in liver of Atlantic salmon (Salmo
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Heparanase Expression and TrkC/p75NTR Ratios in Human Medulloblastoma
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Staking out novelty on the genomic frontier
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Validation of Reference Genes for Real-Time Polymerase Chain Reaction Studies in Atlantic Salmon
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Segmental duplications in genome-wide significant loci and housekeeping genes; warning for GAPDH and ACTB
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Adjuvant effect of docetaxel on the immune responses to influenza A H1N1 vaccine in mice
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Monitoring microbial metabolites using an inductively coupled resonance circuit
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Allelopathic Monoterpenes Interfere withArabidopsis thalianaCuticular Waxes and Enhance Transpiration
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Gene expression analysis and classification of mode of toxicity of polycyclic aromatic hydrocarbons (PAHs) in Escherichia
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Analytical Biochemistry
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A plant lignan, 3′-O-Methyl-Nordihydroguaiaretic acid, suppresses papillomavirus E6 protein function, stabilizes p53 protein,
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Epicardial adipose excision slows the progression of porcine coronary atherosclerosis
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Dynamics of interferon-β modulated mRNA biomarkers in multiple sclerosis patients with anti-interferon-β neutralizing antibodies
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How good is a PCR efficiency estimate: Recommendations for precise and robust qPCR efficiency assessments
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Determination of an internal control to apply reverse transcription quantitative PCR to study stress response in the lactic
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Quantifying cytosolic messenger RNA concentrations in Escherichia coli using real-time polymerase chain reaction for a systems
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Validation of Reference Genes for the Determination of Platelet Transcript Level in Healthy Individuals and in Patients with
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International Journal of Molecular Sciences
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Antisense oligodeoxynucleotide inhibition as a potent strategy in plant biology: identification of SUSIBA2 as a transcriptional
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Effects of aging, dietary restriction and glucocorticoid treatment on housekeeping gene expression in rat cortex and hippocampus—Evaluation
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Reverse transcriptase droplet digital PCR shows high resilience to PCR inhibitors from plant, soil and water samples
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Long-term regulation of proximal tubule acid–base transporter abundance by angiotensin II
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Development of a semi-quantitative real-time RT-PCR for the detection of measles virus
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Rapid quantitative analysis using a single molecule counting approach
Christina M. D’Antoni, Martin Fuchs, John L. Harris, Hai-Ping Ko, Raymond E. Meyer, Mark E. Nadel, Jeffrey D. Randall, Jenny
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Analytical Biochemistry
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Stability of reference genes for real-time PCR analyses in channel catfish (Ictalurus punctatus) tissues under varying physiological
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Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology
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Considerations for accurate gene expression measurement by reverse transcription quantitative PCR when analysing clinical
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Rebecca Sanders, Deborah J. Mason, Carole A. Foy, and Jim F. Huggett
Analytical and Bioanalytical Chemistry
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SNAT2 silencing prevents the osmotic induction of transport system A and hinders cell recovery from hypertonic stress
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Effect of high-fat feeding on expression of genes controlling availability of dopamine in mouse hypothalamus
Alex K. Lee, Marjan Mojtahed-Jaberi, Theodosios Kyriakou, Estibaliz Aldecoa-Otalora Astarloa, Matthew Arno, Nichola J. Marshall,
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Improved Biplex Quantitative Real-Time Polymerase Chain Reaction with Modified Primers for Gene Expression Analysis
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Determining ACTB, ATP5B and RPL32 as optimal reference genes for quantitative RT-PCR studies of cryopreserved stallion semen
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Reprogramming of microRNAs by adenosine-to-inosine editing and the selective elimination of edited microRNA precursors in
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PC cell-derived growth factor overexpression promotes proliferation and survival of laryngeal carcinoma
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Novel methods of quantitative real-time PCR data analysis in a murine Helicobacter pylori vaccine model
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Delimiting Allelic Imbalance of TYMS by Allele-Specific Analysis
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Maintained expression of genes associated with metabolism in the ventromedial hypothalamic nucleus despite development of
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Hollian R. Phillipps, Sharon R. Ladyman, and David R. Grattan
Physiological Reports
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Real-time RT–PCR correlates with immunocytochemistry for the detection of disseminated epithelial cells in bone marrow aspirates
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The Luteinizing Hormone Surge Regulates Circadian Clock Gene Expression in the Chicken Ovary
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Chronobiology International
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Quantification of ZP1, ZP2 and ZP3 mRNA of marmoset monkey (Callithrix jacchus) oocytes from periantral and antral follicles
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Inhibitory Effects of Bacteriophages on the Growth of Vibrio sp., Pathogens of Shrimp in the Indian Aquaculture Environment
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Expression of iNOS gene in macrophages stimulated with 17β-estradiol is regulated by free intracellular Ca2+
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Molecular cloning and differential expression of the cat immediate early gene c-fos
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Molecular Brain Research
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Relative quantification and detection of different types of infectious bursal disease virus in bursa of Fabricius and cloacal
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SYBR®Green qPCR Salmonella detection system allowing discrimination at the genus, species and subspecies levels
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Expression and characterisation of tiger shrimp Penaeus monodon penaeidin (mo-penaeidin) in various tissues, during early
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Induction of T helper 1 response by immunization of BALB/c mice with the gene encoding the second subunit ofEchinococcus granulosusantigen
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Impact of reference gene selection for type 2 cannabinoid receptor gene expression studies in human spermatozoa
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Real-time quantitative RT-PCR for low-abundance transcripts in the inner ear: analysis of neurotrophic factor expression
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Hearing Research
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Sp3 Expression in Immune Cells: A Quantitative Study
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Laboratory Investigation
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Rifampicin alters the expression of reference genes used to normalize real-time quantitative RT-PCR data
Johanna Weiss, Dirk Theile, and Walter Emil Haefeli
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Real-time multiplex PCR assay to quantify hepatitis C virus RNA in peripheral blood mononuclear cells
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Quantification of the expression and inducibility of 12 rat cytochrome P450 isoforms by quantitative RT–PCR
Etienne Caron, Nathalie Rioux, Olivier Nicolas, Hugo Lebel-Talbot, and Bettina A. Hamelin
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Temporal changes in regeneration-associated gene expression in cryopreserved rat vascular grafts
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Transplantation Proceedings
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Quantitative analysis throughout pregnancy of placentomal and interplacentomal expression of pregnancy-associated glycoproteins-1
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Osman V. Patel, Osamu Yamada, Keiichiro Kizaki, Toru Takahashi, Kei Imai, and Kazuyoshi Hashizume
Molecular Reproduction and Development
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Detection of the mycoparasiteStachybotrys elegans, using primers with sequence- characterized amplification regions in conventional
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Canadian Journal of Plant Pathology
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Instability of BCR-ABL Gene in Primary and Cultured Chronic Myeloid Leukemia Stem Cells
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JNCI Journal of the National Cancer Institute
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Influence of the photoperiod on growth rate and insulin-like growth factor-I gene expression in Nile tilapiaOreochromis niloticus
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Journal of Fish Biology
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Gene transcription analysis of hazelnut (Corylus avellanaL.) allergens Cor a 1, Cor a 8 and Cor a 11: a comparative study
Cristiano Garino, Monica Locatelli, Jean Daniel Coïsson, Matteo D'Andrea, Elisabetta Cereti, Fabiano Travaglia, and Marco
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International Journal of Food Science & Technology
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Identification of a Calcium Signalling Pathway ofS-[6]-Gingerol in HuH-7 Cells
Xiao-Hong Li, Kristine C. Y. McGrath, Van H. Tran, Yi-Ming Li, Sravan Mandadi, Colin C. Duke, Alison K. Heather, and Basil
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Mechanisms involved in PGE2-induced transactivation of the epidermal growth factor receptor in MH1C1 hepatocarcinoma cells
Ingun Tveteraas, Kristin Müller, Monica Aasrum, John Ødegård, Olav Dajani, Tormod Guren, Dagny Sandnes, and Thoralf Christoffersen
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Molecular cloning and characterisation of cytosolic manganese superoxide dismutase (cytMn-SOD) from the giant freshwater prawn
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Winton Cheng, Ying-Hsiu Tung, Chun-Hung Liu, and Jiann-Chu Chen
Fish & Shellfish Immunology
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20 :438
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Enhanced Expression and Clinical Significance of CC-Chemokine MIP-3alpha in Hepatocellular Carcinoma
C. Rubie, V. O. Frick, M. Wagner, B. Rau, C. Weber, B. Kruse, K. Kempf, B. Tilton, J. Konig, and M. Schilling
Scandinavian Journal of Immunology
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A Method to Increase Efficiency in Testing Pooled Field-Collected Mosquitoes
Daniel M. Chisenhall, Christopher J. Vitek, Stephanie L. Richards, and Christopher N. Mores
Journal of the American Mosquito Control Association
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EF1α is a useful internal reference for studies of gene expression regulation in amphioxus Branchiostoma japonicum
Yanfeng Wang and Shicui Zhang
Fish & Shellfish Immunology
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Selection of suitable reference genes for normalization of genes of interest in canine soft tissue sarcomas using quantitative
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K. W. Zornhagen, A. T. Kristensen, A. E. Hansen, J. Oxboel, and A. Kjaer
Veterinary and Comparative Oncology
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Functional characterization of EMSY gene amplification in human cancers
Paul M Wilkerson, Konstantin J Dedes, Daniel Wetterskog, Alan Mackay, Maryou B Lambros, Marthe Mansour, Jessica Frankum, Christopher
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The Journal of Pathology
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Androgen receptor gene expression in leucocytes is hormonally regulated: implications for gender differences in disease pathogenesis
Mark A. Sader, Kristine C. Y. McGrath, Michelle D. Hill, Ken F. Bradstock, Mark Jimenez, David J. Handelsman, David S. Celermajer,
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Genetic diversity of expressed Plasmodium falciparum var genes from Tanzanian children with severe malaria
Joseph Mugasa, Weihong Qi, Sebastian Rusch, Matthias Rottmann, and Hans-Peter Beck
Malaria Journal
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RT-PCR analysis of the expression of POMC and its processing enzyme PC1 in amphibian melanotropes
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General and Comparative Endocrinology
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Partially double-stranded linear DNA probes: Novel design for sensitive detection of genetically polymorphic targets
Ka-Cheung Luk, Sushil G. Devare, and John R. Hackett
Journal of Virological Methods
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Real-time polymerase chain reaction assays for leukocyte CD and cytokine mRNAs of the Eastern woodchuck (Marmota monax)
Stephan Menne, Yun Wang, Scott D. Butler, John L. Gerin, Paul J. Cote, and Bud C. Tennant
Veterinary Immunology and Immunopathology
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Rapid and multiplexed transcript analysis of microbial cultures using capillary electophoresis-detectable oligonucleotide
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Jari J. Rautio, Kari Kataja, Reetta Satokari, Merja Penttilä, Hans Söderlund, and Markku Saloheimo
Journal of Microbiological Methods
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Selection of Reference Genes for Gene Expression Studies in Zucchini (Cucurbita pepo) Using qPCR
Ángeles Obrero, Jose V. Die, Belén Román, Pedro Gómez, Salvador Nadal, and Clara I. González-Verdejo
Journal of Agricultural and Food Chemistry
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Development of a widely applicable positive control strategy to support detection of infectious salmon anaemia virus (ISAV)
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M Snow, P McKay, and I Matejusova
Journal of Fish Diseases
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End-stage renal failure and regulatory activities of CD4+CD25bright+FoxP3+ T-cells
T. K. Hendrikx, E. A. F. J. van Gurp, W. M. Mol, W. Schoordijk, V. D. K. D. Sewgobind, J. N. M. IJzermans, W. Weimar, and
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Comparison of Long Noncoding RNA and mRNA Expression Profiles in Mesenchymal Stem Cells Derived from Human Periodontal Ligament
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Rui Dong, Juan Du, Liping Wang, Jinsong Wang, Gang Ding, Songlin Wang, and Zhipeng Fan
BioMed Research International
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Development of generic Taqman PCR and RT-PCR assays for the detection of DNA and mRNA of β-actin-encoding sequences in a wide
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Géraldine Piorkowski, Cécile Baronti, Xavier de Lamballerie, Lauriane de Fabritus, Laurence Bichaud, Boris A. Pastorino, and
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Journal of Virological Methods
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Characterisation of amyloid-induced inflammatory responses in the rat retina
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Experimental Brain Research
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Quantitative PCR Deconstruction of Discrepancies between Results Reported by Different Hybridization Platforms
Federico M. Goodsaid, Roger J. Smith, and I.Y. Rosenblum
Environmental Health Perspectives
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Relative quantitative proteomic analysis reveals wound response proteins correlated with after-cooking darkening
J. Patrick Murphy, Fanming Kong, Devanand M. Pinto, and Gefu Wang-Pruski
PROTEOMICS
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TaqMan real-time PCR assay for the detection and quantification of Sclerospora graminicola, the causal agent of pearl millet
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Bandamaravuri Kishore Babu and Rajan Sharma
European Journal of Plant Pathology
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UBC and YWHAZ as suitable reference genes for accurate normalisation of gene expression using MCF7, HCT116 and HepG2 cell
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Siang Ling Chua, Wei Cun See Too, Boon Yin Khoo, and Ling Ling Few
Cytotechnology
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β2-microglobulin is required for the full expression of xenobiotic-induced systemic autoimmunity
Kenneth M. Pollard, Per Hultman, Christopher B. Toomey, David M. Cauvi, and Dwight H. Konoc
Journal of Immunotoxicology
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In vivo activation ofSMNin spinal muscular atrophy carriers and patients treated with valproate
Lars Brichta, Irmgard Holker, Karsten Haug, Thomas Klockgether, and Brunhilde Wirth
Annals of Neurology
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Establishment of a real-time PCR protocol for expression studies of secondary metabolite biosynthetic gene clusters in the
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Carsten Kegler, Klaus Gerth, and Rolf Müller
Journal of Biotechnology
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Biomolecular Detection and Quantification
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Cytochrome P450-2C11 mRNA Is Not Expressed in Endothelial Cells Dissected from Rat Renal Arterioles
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Nephron Physiology
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Pathway and single gene analyses of inhibited Caco-2 differentiation by ascorbate-stabilized quercetin suggest enhancement
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Ashwin A. Dihal, Chantal Tilburgs, Marjan J. van Erk, Ivonne M. C. M. Rietjens, Ruud A. Woutersen, and Rob H. Stierum
Molecular Nutrition & Food Research
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The skeletal effects of thiazolidinedione and metformin on insulin-resistant mice
Chun Wang, Hong Li, Sheng-Guang Chen, Jin-Wei He, Chun-Jun Sheng, Xiao-Yun Cheng, Shen Qu, Ke-Sheng Wang, Mei-Ling Lu, and
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Transcription profiling of immune genes during parasite infection in susceptible and resistant strains of the flour beetles
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Daibin Zhong, Mei-Hui Wang, Aditi Pai, and Guiyun Yan
Experimental Parasitology
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Emerging Roles of Small Epstein-Barr Virus Derived Non-Coding RNAs in Epithelial Malignancy
Raymond Lung, Joanna Tong, and Ka-Fai To
International Journal of Molecular Sciences
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Localization of the ammonium transporters, Rh B glycoprotein and Rh C glycoprotein, in the mouse liver
I.David Weiner, R.Tyler Miller, and Jill W Verlander
Gastroenterology
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Evolution of the Insect Desaturase Gene Family with an Emphasis on Social Hymenoptera
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Validation of real-time reverse-transcription-polymerase chain reaction for quantification of capecitabine-metabolizing enzymes
Janet S. Macpherson, Duncan I. Jodrell, and Sylvie M. Guichard
Analytical Biochemistry
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Construction of Geobacillus thermoglucosidasius cDNA library and analysis of genes expressed in response to heat stress
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Molecular Biology Reports
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Development of Plasmid Calibrators for Absolute Quantification of miRNAs by Using Real-Time qPCR
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The Journal of Molecular Diagnostics
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High levels of PROM1 (CD133) transcript are a potential predictor of poor prognosis in medulloblastoma
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Selection and validation of reference genes for functional studies in the Calliphoridae family
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Journal of Insect Science
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Adaptation of Rhizobium leguminosarum to pea, alfalfa and sugar beet rhizospheres investigated by comparative transcriptomics
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Genome Biology
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Impact of normalization strategy on cardiac expression of pro-inflammatory cytokines: Evaluation of reference genes in different
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Chiara Caselli, Andrea D’Amico, Raffaele Caruso, Manuela Cabiati, Tommaso Prescimone, Lorena Cozzi, Aldo Cannata, Oberdan
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Tumor model-specific proviral insertional mutagenesis of the Fos/Jdp2/Batf locus
M.H. Rasmussen, A.B. Sørensen, D.W. Morris, J.C. Dutra, E.K. Engelhard, C.L. Wang, J. Schmidt, and F.S. Pedersen
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Reference Gene Selection for Real-Time RT-PCR in Eight Kinds of Rat Regenerating Hepatic Cells
Gai-Ping Wang and Cun-Shuan Xu
Molecular Biotechnology
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Pre–B cell colony–enhancing factor inhibits neutrophil apoptosis in experimental inflammation and clinical sepsis
Song Hui Jia, Yue Li, Jean Parodo, Andras Kapus, Lingzhi Fan, Ori D. Rotstein, and John C. Marshall
Journal of Clinical Investigation
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Effect of gastro-intestinal conditions on the growth of Enterococcus mundtii ST4SA, and production of bacteriocin ST4SA recorded
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M. Granger, C.A. van Reenen, and L.M.T. Dicks
International Journal of Food Microbiology
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Primer on Medical Genomics Part II: Background Principles and Methods in Molecular Genetics
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Assessment of real-time RT-PCR for quantification of Lactobacillus plantarum gene expression during stationary phase and nutrient
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M.L. Marco and M. Kleerebezem
Journal of Applied Microbiology
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Identification and validation of suitable reference genes for quantitative expression of xylA and xylE genes in Pseudomonas
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Journal of Bioscience and Bioengineering
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Muscle and Nerve Responses After Different Intervals of Electrical Stimulation Sessions on Denervated Rat Muscle
Silvana Coca Lima, Quélen Milani Caierão, Sabrina Messa Peviani, Thiago Luiz Russo, Marco César Somazz, Tania Fátima Salvini,
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American Journal of Physical Medicine & Rehabilitation
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Real-time RT-PCR quantification of mRNA encoding cytokines and chemokines in histologically normal canine nasal, bronchial
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Veterinary Immunology and Immunopathology
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Expression of enzymes of cyclooxygenase pathway and secretion of prostaglandin E2 and F2α by porcine myometrium during luteolysis
and early pregnancy
A. Franczak, G. Kotwica, B. Kurowicka, A. Oponowicz, I. Wocławek-Potocka, and B.K. Petroff
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Decreased expression of tumor necrosis factor family receptors involved in humoral immune responses in preterm neonates
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Blood
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Germ layer specification and axial patterning in the embryonic development of the freshwater planarian Schmidtea polychroa
José María Martín-Durán, Enrique Amaya, and Rafael Romero
Developmental Biology
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Evaluation of reference genes for quantitative real-time PCR analysis of gene expression during early development processes
of the tongue sole (Cynoglossus semilaevis)
Qian Ma, Zhimeng Zhuang, Wenrong Feng, Shufang Liu, and Qisheng Tang
Acta Oceanologica Sinica
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A clone screening method using mRNA levels to determine specific productivity and product quality for monoclonal antibodies
Christina J. Lee, Gargi Seth, Joni Tsukuda, and Robert W. Hamilton
Biotechnology and Bioengineering
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Structure of primate and rodent orthologs of the prostate cancer susceptibility gene ELAC2
Martine Dumont, David Frank, Anne-Marie Moisan, Martine Tranchant, Penny Soucy, Rock Breton, Fernand Labrie, Sean V. Tavtigian,
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The presence of endometrial cells in the peritoneal cavity enhances monocyte recruitment and induces inflammatory cytokines
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Xuan Cao, DongZi Yang, MingQing Song, Ana Murphy, and Sampath Parthasarathy
Fertility and Sterility
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Expression analysis of multiple myeloma CD138 negative progenitor cells using single molecule microarray readout
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A TaqMan real-time PCR-based assay for the identification of Fasciola spp.
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Biochemical and molecular analysis of Ginsenoside biosynthesis in Panax ginseng during flower and berry development
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A review on viral biosensors to detect human pathogens
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The Importance of Reference Gene Analysis of Formalin-Fixed, Paraffin-Embedded Samples from Sarcoma Patients — An Often Underestimated
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Engineered Lactobacillus rhamnosus GG expressing IgG-binding domains of protein G: Capture of hyperimmune bovine colostrum
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Aromatase cytochrome P450: cloning, intron variation, and ontogeny of gene expression in southern flounder (Paralichthys lethostigma)
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Development of Real-Time RT-PCR Assay for Detection ofPrunus necrotic ringspot virusin Fruit Trees
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Bluetongue virus detection by two real-time RT-qPCRs targeting two different genomic segments
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Alterations in stress-associated behaviors and neurochemical markers in adult rats after neonatal short-lasting local inflammatory
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Prostacyclin Analogs Inhibit Fibroblast Contraction of Collagen Gels through the cAMP-PKA Pathway
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Attenuation of Liver Pro-Inflammatory Responses by Zingiber officinale via Inhibition of NF-kappa B Activation in High-Fat
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The effect of stable macromolecular complexes of ionic polyphosphazene on HIV Gag antigen and on activation of human dendritic
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Differential expression of vascular endothelial growth factor–A isoforms at different stages of melanoma progression
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Analysis of CD14 Expression Levels in Putative Mesenchymal Progenitor Cells Isolated from Equine Bone Marrow
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Developmental and Steroidogenic Effects on the Gene Expression of RFamide Related Peptides and their Receptor in the Rat Brain
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Suitability of three common reference genes for quantitative real-time PCR in honey bees
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Quantification of Melanoma mRNA Markers in Sentinel Nodes
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Differential CXC Receptor Expression in Colorectal Carcinomas
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Insights into possible cell-death markers in the diatom Skeletonema marinoi in response to senescence and silica starvation
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Stable inhibition of human thymidylate synthase expression following retroviral introduction of an siRNA gene
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Candidate reference genes for quantitative real-time PCR (qPCR) assays during development of a diet-related enteropathy in
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Overexpression of UCP-3 in Skeletal Muscle of Mice Results in Increased Expression of Mitochondrial Thioesterase mRNA
Gary B.T. Moore, Jean Himms-Hagen, Mary-Ellen Harper, and John C. Clapham
Biochemical and Biophysical Research Communications
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Multiplex PCR using real time DNA amplification for the rapid detection and quantitation of HTLV I or II
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Changes in immune gene expression and resistance to bacterial infection in lobster (Homarus gammarus) post-larval stage VI
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Molting in Salmonella Enteritidis-Challenged Laying Hens Fed Alfalfa Crumbles. I. Salmonella Enteritidis Colonization and
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Quantitative real-time RT-PCR measurement of cytokine mRNA expression in the skin of normal cats and cats with allergic skin
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Cloning and characterisation of mitochondrial manganese superoxide dismutase (mtMnSOD) from the giant freshwater prawn Macrobrachium
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Fish & Shellfish Immunology
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Comparative analysis of hypermethylation of cell cycle control and DNA-mismatch repair genes in low-density and CD34+ bone
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σN-dependent control of acid resistance and the locus of enterocyte effacement in enterohemorrhagicEscherichia coliis activated
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Effect of methotrexate combined with ginger, silymarin or propolis on the mRNA expression levels of cytochrome P450 oxidoreductase
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Validation of housekeeping genes as internal controls for studying gene expression during Pacific oyster (Crassostrea gigas)
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Yishuai Du, Linlin Zhang, Fei Xu, Baoyu Huang, Guofan Zhang, and Li Li
Fish & Shellfish Immunology
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Establishment of real-time quantitative reverse transcription polymerase chain reaction assay for transcriptional analysis
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Expression of Adenosine A2A Receptors in the Rat Lumbar Spinal Cord and Implications in the Modulation of N-Methyl-d-Aspartate
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Emmanuel Guntz, Hélène Dumont, Els Pastijn, Alban de Kerchove d’Exaerde, Karima Azdad, Maurice Sosnowski, Serge N. Schiffmann,
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Fluorescence based strategies for genetic analysis
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Quantification of VEGF-C expression in canine mammary tumours
C Qiu, DD LIN, HH Wang, CH Qiao, J Wang, and T Zhang
Australian Veterinary Journal
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Assessing gene expression variation in normal human tissues using GeneTag™, a novel, global, sensitive profiling method
Lily Y Wong, Andrea Hafeman, Victoria L Boyd, John Bodeau, Katherine D Lazaruk, Sueh-Ning Liew, Peter Casey, Victor Belonogoff,
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Genome-Wide Gene Expression Analysis of NIH 3T3 Cell Line Under Mechanical Stimulation
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Cellular and Molecular Bioengineering
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Cannabinoid receptors are widely expressed in goldfish: molecular cloning of a CB2-like receptor and evaluation of CB1 and
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Fish Physiology and Biochemistry
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SseA acts as the chaperone for the SseB component of the Salmonella Pathogenicity Island 2 translocon
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Molecular Microbiology
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Trichoderma G protein-coupled receptors: functional characterisation of a cAMP receptor-like protein from Trichoderma atroviride
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Current Genetics
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Effect of FSH and LH hormones on oocyte maturation of buffalo and gene expression analysis of their receptors and Cx43 in
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Zygote
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The Influence of Immunohistochemistry on mRNA Recovery from Microdissected Frozen and Formalin-Fixed, Paraffin-Embedded Sections
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Searching for the Answer to Irritable Bowel Syndrome in the Colonic Mucosa: SERTainty and UnSERTainty
Robin Spiller and Andrew Bennett
Gastroenterology
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Two new members of the Tetrahymena multi-stress-inducible metallothionein family: Characterization and expression analysis
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Francisco Amaro, María del Pilar de Lucas, Ana Martín-González, and Juan Carlos Gutiérrez
Gene
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Drought-Induced Oxidative Conditions in Rice Anthers Leading to a Programmed Cell Death and Pollen Abortion
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Evaluation of reference genes for real-time quantitative PCR studies in Candida glabrata following azole treatment
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The effect of ocean acidification on symbiont photorespiration and productivity inAcropora formosa
ALICIA CRAWLEY, DAVID I. KLINE, SIMON DUNN, KEN ANTHONY, and SOPHIE DOVE
Global Change Biology
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Identification of suitable reference genes for real-time RT-PCR normalization in the grapevine-downy mildew pathosystem
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Validation of reference genes for quantitative real-time PCR during latex regeneration in rubber tree
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Assays for the Identification and Prioritization of Drug Candidates for Spinal Muscular Atrophy
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Development of a one-step real-time quantitative PCR assay based on primer-probe energy transfer for the detection of porcine
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Journal of Virological Methods
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Differential mRNA stability to endogenous ribonucleases of the coding region and 3′ untranslated regions of wheat (Triticum
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Molecular Function of TCF7L2: Consequences of TCF7L2 Splicing for Molecular Function and Risk for Type 2 Diabetes
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Gene Expression of a Green Fluorescent Protein Homolog as a Host-Specific Biomarker of Heat Stress Within a Reef-Building
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Development of a real-time PCR method for quantification of the three genera Dehalobacter, Dehalococcoides, and Desulfitobacterium
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Analytical Biochemistry
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Peripheral Blood Mitochondrial DNA/Nuclear DNA (mtDNA/nDNA) Ratio as a Marker of Mitochondrial Toxicities of Stavudine Containing
Antiretroviral Therapy in HIV-Infected Malawian Patients
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OMICS: A Journal of Integrative Biology
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Mucosal assessment of tumor necrosis factor alpha levels on paraffined samples: a comparison between immunohistochemistry
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Scandinavian Journal of Gastroenterology
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Stabilization of human interferon-α1 mRNA by its antisense RNA
Tominori Kimura, Shiwen Jiang, Mikio Nishizawa, Emi Yoshigai, Iwao Hashimoto, Masao Nishikawa, Tadayoshi Okumura, and Hisao
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Cellular and Molecular Life Sciences
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Age and diet act through distinct isoforms of the class II transactivator gene in mouse intestinal epithelium
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Gastroenterology
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Growth and genetic responses of Salmonella Typhimurium to pH-shifts in an anaerobic continuous culture
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Anaerobe
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Real-time RT-PCR quantification of Kuruma shrimp transcripts: A comparison of relative and absolute quantification procedures
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Journal of Biotechnology
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Prolactin gene expression in primary central nervous system tumors
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Journal of Negative Results in BioMedicine
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Effect of heavy metals onacdSgene expression inHerbaspirilliumsp. GW103 isolated from rhizosphere soil
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Real-Time PCR and its Applications in Human Papillomavirus Quantitation and Physical Status Identification
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Biotechnology & Biotechnological Equipment
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Biochemical investigation of the effects of human platelet releasates on human articular chondrocytes
Adriano Spreafico, Federico Chellini, Bruno Frediani, Giulia Bernardini, Silvia Niccolini, Tommaso Serchi, Giulia Collodel,
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High Levels of Thyrotropin-Releasing Hormone Receptors Activate Programmed Cell Death in Human Pancreatic Precursors
Christopher M. Mulla, Elizabeth Geras-Raaka, Bruce M. Raaka, and Marvin C. Gershengorn
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A rolling circle amplification-based DNA machine for miRNA screening coupling catalytic hairpin assembly with DNAzyme formation
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Real-time analysis of Polymyxa betae GST expression in infected sugar beet
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Molecular Plant Pathology
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Quantitative analysis of gender-regulated transcripts in the filarial nematode Brugia malayi by real-time RT-PCR
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Differential expression of two gonadotropin (GTH) beta subunit genes during ovarian maturation induced by repeated injection
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Fisheries Science
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Heterologous microarray experiments used to identify the early gene response to heat stress in a coral reef fish
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Molecular Ecology
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Environmental Research
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iTRAQ-based proteomic study of the effects of Spiroplasma eriocheiris on Chinese mitten crab Eriocheir sinensis hemocytes
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Fish & Shellfish Immunology
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Interactions between algicidal bacteria and the cyanobacterium Microcystis aeruginosa: lytic characteristics and physiological
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International Journal of Environmental Science and Technology
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Dietary Fiber Intake Increases the Risk of Zinc Deficiency in Healthy and Diabetic Women
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Gene transcription acceleration: main cause of hepatitis B surface antigen production improvement by dimethyl sulfoxide in
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Quantification of inflammatory cellular responses using real-time polymerase chain reaction
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Immune response of white shrimp, Litopenaeus vannamei, after a concurrent infection with white spot syndrome virus and infectious
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Fish & Shellfish Immunology
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Receptor modulation and functional activation of human CD34+Lin−-derived immature NK cells in vitro by Mycobacterium bovisBacillus
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Quantitative PCR measurements of the effects of introducing inosines into primers provides guidelines for improved degenerate
primer design
Linda Zheng, Mark J. Gibbs, and Brendan C. Rodoni
Journal of Virological Methods
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Hypoxia-inducible factor and vascular endothelial growth factor in the neuroretina and retinal blood vessels after retinal
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Gisela Håkansson, Bodil Gesslein, Lotta Gustafsson, Ulrica Englund-Johansson, and Malin Malmsjö
Journal of Ocular Biology, Diseases, and Informatics
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3 :20
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Quantitative reverse transcription polymerase chain reaction analysis of Porphyromonas gingivalis gene expression in vivo
Charles E. Shelburne, Raymond M. Gleason, Gregory R. Germaine, Larry F. Wolff, Brian H. Mullally, Wilson A. Coulter, and Dennis
E. Lopatin
Journal of Microbiological Methods
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49 :147
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A Three-Dimensional Tubular Scaffold that Modulates the Osteogenic and Vasculogenic Differentiation of Rat Bone Marrow Stromal
Cells
Mani T. Valarmathi, Michael J. Yost, Richard L. Goodwin, and Jay D. Potts
Tissue Engineering Part A
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14 :491
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Quantitative mRNA expression analysis of neurotrophin-receptor TrkC and oncogene c-MYC from formalin-fixed, paraffin-embedded
primitive neuroectodermal tumor samples
Franzisca Kunz, Tarek Shalaby, Doris Lang, André von Büren, Johannes A. Hainfellner, Irene Slavc, Ghazaleh Tabatabai, and
Michael A. Grotzer
Neuropathology
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26 :393
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Real-time RT-PCR detection of CK19, CK7 and MUC1 mRNA for diagnosis of lymph node micrometastases in non small cell lung carcinoma
Pierre Saintigny, Séverine Coulon, Marianne Kambouchner, Sylvie Ricci, Emmanuel Martinot, Claire Danel, Jean-Luc Breau, and
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International Journal of Cancer
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Characterization of a Non-fibrillar-Related Collagen in the Mollusc Haliotis tuberculata and its Biological Activity on Human
Dermal Fibroblasts
Christophe Fleury, Antoine Serpentini, Magdalini Kypriotou, Emmanuelle Renard, Philippe Galéra, and Jean-Marc Lebel
Marine Biotechnology
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13 :1003
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Evaluation of rotavirus dsRNA load in specimens and body fluids from experimentally infected juvenile macaques by real-time
PCR
Wei Zhao, Mingjing Xia, Tamika Bridges-Malveo, Mayra Cantú, Monica M. McNeal, Anthony H. Choi, Richard L. Ward, and Karol
Sestak
Virology
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341 :248
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Housekeeping gene variability in normal and cancerous colorectal, pancreatic, esophageal, gastric and hepatic tissues
Claudia Rubie, Katja Kempf, Joachim Hans, Tiefen Su, Bettina Tilton, Thomas Georg, Brigitte Brittner, Bianca Ludwig, and Martin
Schilling
Molecular and Cellular Probes
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19 :101
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Th1/Th2 biasing effects of vaccination in cattle as determined by real-time PCR
Angelo Mena, Xenia P. Ioannou, Andrew Van Kessel, Sylvia Van Drunen Little-Van Den Hurk, Yurij Popowych, Lorne A. Babiuk,
and Dale L. Godson
Journal of Immunological Methods
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263 :11
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Exploring valid internal-control genes in Porphyra yezoensis (Bangiaceae) during stress response conditions
Wenlei Wang, Xiaojie Wu, Chao Wang, Zhaojun Jia, Linwen He, Yifan Wei, Jianfeng Niu, and Guangce Wang
Chinese Journal of Oceanology and Limnology
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32 :783
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Preparation and PCR-Amplification Properties of a Novel Amphiphilic Poly(N-vinylpyrrolidone) (PVP) Copolymer
Lifen Zhang, Yong Liang, Lingzhi Meng, Xiaoju Lu, and Yunhai Liu
Chemistry & Biodiversity
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4 :163
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Gene expression profiling as functional readout of rodent models for psychiatric disorders
Raffaella Molteni, Flavia Macchi, and Marco A. Riva
Cell and Tissue Research
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354 :51
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High capacity Na+/H+ exchange activity in mineralizing osteoblasts
Li Liu, Paul H. Schlesinger, Nicole M. Slack, Peter A. Friedman, and Harry C. Blair
Journal of Cellular Physiology
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226 :1702
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Virulence control in group A Streptococcus by a two-component gene regulatory system: Global expression profiling and in vivo
infection modeling
M. R. Graham, L. M. Smoot, C. A. L. Migliaccio, K. Virtaneva, D. E. Sturdevant, S. F. Porcella, M. J. Federle, G. J. Adams,
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Proceedings of the National Academy of Sciences
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Validation of Reference Genes for Quantitative Expression Analysis by Real-Time RT-PCR in Four Lepidopteran Insects
Xiaolu Teng, Zan Zhang, Guiling He, Liwen Yang, and Fei Li
Journal of Insect Science
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12 :1
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Histamine modulates microglia function
Raquel Ferreira, Tiago Santos, Joana Gonçalves, Graça Baltazar, Lino Ferreira, Fabienne Agasse, and Liliana Bernardino
Journal of Neuroinflammation
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9 :90
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Quantitative simultaneous multiplex real-time PCR for the detection of porcine cytokines
J.C. Duvigneau, R.T. Hartl, S. Groiss, and M. Gemeiner
Journal of Immunological Methods
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306 :16
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Metabolic, pathologic, and genetic analysis of prostate tissues: quantitative evaluation of histopathologic and mRNA integrity
after HR-MAS spectroscopy
Carissa F. Santos, John Kurhanewicz, Z. Laura Tabatabai, Jeffry P. Simko, Kayvan R. Keshari, Akpene Gbegnon, Romelyn DeLos
Santos, Scot Federman, Katsuto Shinohara, Peter R. Carroll, Christopher M. Haqq, and Mark G. Swanson
NMR in Biomedicine
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Differential gene expression in mummichogs (Fundulus heteroclitus) following treatment with pyrene: comparison to a creosote
contaminated site
Jonathan A. Roling, Lisa J. Bain, and William S. Baldwin
Marine Environmental Research
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57 :377
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Quantitative real time RT-PCR study of pathogen-induced gene expression in rock bream (Oplegnathus fasciatus): Internal controls
for data normalization
Bao-cun Zhang, Li Sun, Zhi-zhong Xiao, and Yong-hua Hu
Marine Genomics
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15 :75
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Frequent down-regulation and deletion of KLF6 in primary hepatocellular carcinoma
Shaoping Wang, Lili Kang, Xiaoping Chen, and Hejun Zhou
Journal of Huazhong University of Science and Technology [Medical Sciences]
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30 :470
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Culture-Independent Rapid Detection Methods for Bacterial Pathogens and Toxins in Food Matrices
Yun Wang and Joelle K. Salazar
Comprehensive Reviews in Food Science and Food Safety
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An assessment of drilling disturbance on Echinus acutus var. norvegicus based on in-situ observations and experiments using
a remotely operated vehicle (ROV)
S.J.M. Hughes, D.O.B. Jones, C. Hauton, A.R. Gates, and L.E. Hawkins
Journal of Experimental Marine Biology and Ecology
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395 :37
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Effect of human platelet supernatant on proliferation and matrix synthesis of human articular chondrocytes in monolayer and
three-dimensional alginate cultures
C. Gaissmaier, J. Fritz, T. Krackhardt, I. Flesch, W.K. Aicher, and N. Ashammakhi
Biomaterials
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Identification and selection of normalization controls for quantitative transcript analysis inBlumeria graminis
Helen G. Pennington, Linhan Li, and Pietro D. Spanu
Molecular Plant Pathology
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Characterization of the Interferon-α Response of Pigs to the Weaning Stress
Elisabetta Razzuoli, Riccardo Villa, Enrico Sossi, and Massimo Amadori
Journal of Interferon & Cytokine Research
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31 :237
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Use of next generation sequencing data to develop a qPCR method for specific detection of EU-unauthorized genetically modified
Bacillus subtilis overproducing riboflavin
Elodie Barbau-piednoir, Sigrid C. J. De Keersmaecker, Maud Delvoye, Céline Gau, Patrick Philipp, and Nancy H. Roosens
BMC Biotechnology
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15 :
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Inhibitory Effect of a French Maritime Pine Bark Extract-Based Nutritional Supplement on TNF-α-Induced Inflammation and Oxidative
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Kristine C. Y. McGrath, Xiao-Hong Li, Lucinda S. McRobb, and Alison K. Heather
Evidence-Based Complementary and Alternative Medicine
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Cytokine mRNA Quantification in Duodenal Mucosa from Dogs with Chronic Enteropathies by Real-Time Reverse Transcriptase Polymerase
Chain Reaction
Iain R. Peters, Chris R. Helps, Emma L. Calvert, Edward J. Hall, and Michael J. Day
Journal of Veterinary Internal Medicine
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19 :644
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Detection and quantification of infectious hematopoietic necrosis virus in rainbow trout (Oncorhynchus mykiss) by SYBR Green
real-time reverse transcriptase-polymerase chain reaction
Arun K. Dhar, Robert M. Bowers, Kate S. Licon, and Scott E. LaPatra
Journal of Virological Methods
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147 :157
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Evaluation of various housekeeping genes for their applicability for normalization of mRNA expression in dioxin-treated rats
Raimo Pohjanvirta, Marjo Niittynen, Jere Lindén, Paul C. Boutros, Ivy D. Moffat, and Allan B. Okey
Chemico-Biological Interactions
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160 :134
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Identification of genes involved in the sensitivity to antitumour drug 17-allylamino,17-demethoxygeldanamycin (17AAG)
Vincenza Barresi, Cosimo G. Fortuna, Roberta Garozzo, Giuseppe Musumarra, Salvatore Scir?, and Daniele F. Condorelli
Molecular BioSystems
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2 :231
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Differential induction of cellular proliferation, hypertrophy and apoptosis in H9c2 cardiomyocytes by exogenous tissue factor
G. Alkistis Frentzou, Mary E. W. Collier, Anne-Marie L. Seymour, and Camille Ettelaie
Molecular and Cellular Biochemistry
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345 :119
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Selection of reference genes for expression studies in Cicer arietinum L.: analysis of cyp81E3 gene expression against Ascochyta
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Patricia Castro, Belén Román, Josefa Rubio, and José V. Die
Molecular Breeding
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Protein Kinase G Type II Is Required for Night-to-Day Progression of the Mammalian Circadian Clock
Shelley A. Tischkau, Jennifer W. Mitchell, Laura A. Pace, Jessica W. Barnes, Jeffrey A. Barnes, and Martha U. Gillette
Neuron
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43 :539
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Bacterial DNA decontamination for reverse transcription polymerase chain reaction (RT-PCR)
Gehua Wang, Connie Barton, and Frank G Rodgers
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51 :119
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Individual differences in allocation of funds in the dictator game associated with length of the arginine vasopressin 1a receptor
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A. Knafo, S. Israel, A. Darvasi, R. Bachner-Melman, F. Uzefovsky, L. Cohen, E. Feldman, E. Lerer, E. Laiba, Y. Raz, L. Nemanov,
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A method for the rapid construction of cRNA standard curves in quantitative real-time reverse transcription polymerase chain
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Molecular and Cellular Probes
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16 :99
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Differential Expression of Metallothionein 1 and 2 Isoforms in Breast Cancer Lines with Different Invasive Potential
Siew-Kian Tai, Owen June-Keong Tan, Vincent Tak-Kwong Chow, Rongxian Jin, J. Louise Jones, Puay-Hoon Tan, Anita Jayasurya,
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The American Journal of Pathology
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163 :2009
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Molecular characterization of a putative heat shock protein cognate gene in Rhynchosciara americana
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Chromosome Research
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Reverse Transcription of 18S rRNA with Poly(dT)18 and Other Homopolymers
Milica D. Bogdanović, Milan B. Dragićević, Nikola T. Tanić, Slađana I. Todorović, Danijela M. Mišić, Suzana T. Živković, Alain
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Plant Molecular Biology Reporter
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Degradation of mitochondrial DNA in cryoprotectant-treated hard coral (Echinoporaspp.) oocytes
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Identification of Appropriate Reference Genes for qRT-PCR Analysis of Heat-Stressed Mammary Epithelial Cells in Riverine Buffaloes
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ISRN Biotechnology
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Analysis of group A streptococcus gene expression in humans with pharyngitis using a microarray
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Optimization and application of real-time PCR method for detecting the expression levels of nitrogen assimilation-related
genes in rice
S. P. Zhao, X. Q. Zhao, S. M. Li, and W. M. Shi
Russian Journal of Plant Physiology
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53 :560
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A rapid real-time qRT-PCR assay for ovine β-actin mRNA
Helga Bjarnadottir and Jon J. Jonsson
Journal of Biotechnology
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Regulation of naturally occurring antisense RNA of myosin heavy chain (MyHC) in neonatal cardiomyocytes
H.P. Luther, H. Bartsch, I. Morano, S. Podlowski, and G. Baumann
Journal of Cellular Biochemistry
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94 :848
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Identification of valid reference housekeeping genes for gene expression analysis in tumor neovascularization studies
Monica Rienzo, Concetta Schiano, Amelia Casamassimi, Vincenzo Grimaldi, Teresa Infante, and Claudio Napoli
Clinical and Translational Oncology
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15 :211
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Seasonal changes of responses to gonadotropin-releasing hormone analog in expression of growth hormone/prolactin/somatolactin
genes in the pituitary of masu salmon
Ramji Kumar Bhandari, Shinya Taniyama, Takashi Kitahashi, Hironori Ando, Kohei Yamauchi, Yonathan Zohar, Hiroshi Ueda, and
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General and Comparative Endocrinology
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130 :55
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Functional relevance of three proopiomelanocortin (POMC) genes in darkening camouflage, blind-side hypermelanosis, and appetite
of Paralichthys olivaceus
Duk-Young Kang and Hyo-Chan Kim
Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology
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Evaluation of three reference genes ofEscherichia colifor mRNA expression level normalization in view of salt and organic
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Silvio Peng, Roger Stephan, Jörg Hummerjohann, and Taurai Tasara
FEMS Microbiology Letters
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A Two-Step Method for the Extraction of High-Quality RNA from Endoscopic Biopsies
Thomas Wex, Gerhard Treiber, Uwe Lendeckel, and Peter Malfertheiner
Clinical Chemistry and Laboratory Medicine
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A quantitative real-time RT-PCR assay for salmon IGF-I mRNA, and its application in the study of GH regulation of IGF-I gene
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A.L Pierce, J.T Dickey, D.A Larsen, H Fukada, P Swanson, and W.W Dickhoff
General and Comparative Endocrinology
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135 :401
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Molecular characterization of a retrotransposon in the Rhynchosciara americana genome and its association with telomere
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Atrogin-1/MAFbx and MuRF1 Are Downregulated in Aging-Related Loss of Skeletal Muscle
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The Journals of Gerontology Series A: Biological Sciences and Medical Sciences
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61 :663
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Real-Time Quantitative PCR of Microdissected Paraffin-Embedded Breast Carcinoma
Lise Mette Gjerdrum, Boe Sandahl Sorensen, Eigil Kjeldsen, Flemming Brandt Sorensen, Ebba Nexo, and Stephen Hamilton-Dutoit
The Journal of Molecular Diagnostics
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6 :42
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Quantitative Analysis of High-Risk Human Papillomavirus Types in Abnormal Cervical Smears
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Biotechnology & Biotechnological Equipment
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Light-Dependent Development of Circadian Gene Expression in Transgenic Zebrafish
Maki Kaneko, Gregory M Cahill, and Ueli Schibler
PLoS Biology
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3 :e34
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Loss of cytosolic fructose-1,6-bisphosphatase limits photosynthetic sucrose synthesis and causes severe growth retardations
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SANG-KYU LEE, JONG-SEONG JEON, FREDERIK BÖRNKE, LARS VOLL, JUNG-IL CHO, CHANG-HYO GOH, SUK-WON JEONG, YOUN-IL PARK, SUNG JIN
KIM, SANG-BONG CHOI, AKIO MIYAO, HIROHIKO HIROCHIKA, GYNHEUNG AN, MAN-HO CHO, SEONG HEE BHOO, UWE SONNEWALD, and TAE-RYONG
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31 :1851
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Hippocampal gene expression profiling in spatial discrimination learning
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Neurobiology of Learning and Memory
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Nicotinamide treatment reduces the levels of oxidative stress, apoptosis, and PARP-1 activity in Aβ(1–42)-induced rat model
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Free Radical Research
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Rapid transformation of white adipocytes into fat-oxidizing machines
L. Orci, W. S. Cook, M. Ravazzola, M.-y. Wang, B.-H. Park, R. Montesano, and R. H. Unger
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Effect of Dietary Carbohydrate Source on the Development of Obesity inAgoutiTransgenic Mice**
Kristin L. Morris and Michael B. Zemel
Obesity Research
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Central Nervous System Injury Triggers Hepatic CC and CXC Chemokine Expression that Is Associated with Leukocyte Mobilization
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Sandra J. Campbell, V. Hugh Perry, Fernando J. Pitossi, Angus G. Butchart, Mariela Chertoff, Sara Waters, Robert Dempster,
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The American Journal of Pathology
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Selective alterations of gene expression in mice induced by MPTP
Z. Xu, D. Cawthon, K.A. McCastlain, W. Slikker, and S.F. Ali
Synapse
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Can we exclude theTXNIP gene as a candidate gene for familial combined hyperlipidemia?
Gerly M. van der Vleuten, Anneke Hijmans, Sandra Heil, Henk J. Blom, Anton F.H. Stalenhoef, and Jacqueline de Graaf
American Journal of Medical Genetics Part A
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TNF-α, IFN-γ, and IL−1β modulate hyaluronan synthase expression in human skin fibroblasts: Synergistic effect by concomital
treatment with FeSO4 plus ascorbate
Giuseppe M. Campo, Angela Avenoso, Salvatore Campo, D'Ascola Angela, Alida M. Ferlazzo, and Alberto Calatroni
Molecular and Cellular Biochemistry
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292 :169
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Distribution of mRNA coding for 5-hydroxytryptamine receptor subtypes in the intestines of healthy dairy cows and dairy cows
with cecal dilatation-dislocation
Ladina Engel, Barbara Kobel, Edgar C. Ontsouka, Hans U. Graber, Jürg W. Blum, Adrian Steiner, and Mireille Meylan
American Journal of Veterinary Research
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67 :95
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Development of a novel ER stress based selection system for the isolation of highly productive clones
Lars Kober, Christoph Zehe, and Juergen Bode
Biotechnology and Bioengineering
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Cytokine mRNA quantification in histologically normal canine duodenal mucosa by real-time RT-PCR
I.R. Peters, C.R. Helps, E.L. Calvert, E.J. Hall, and M.J. Day
Veterinary Immunology and Immunopathology
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103 :101
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Quantification of cyclin A1 and glyceraldehyde-3-phosphate dehydrogenase expression in testicular biopsies of infertile patients
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Mark Schrader, Stuart Ravnik, Carsten Muller-Tidow, Markus Muller, Bernd Straub, Sven Diedrichs, Hubert Serve, and Kurt Miller
International Journal of Andrology
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25 :202
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High glucose and hydrogen peroxide increase c-Myc and haeme-oxygenase 1 mRNA levels in rat pancreatic islets without activating
NF?B
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Diabetologia
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48 :496
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Modulation of Alpha 1 Adrenergic Receptors on Urinary Bladder in Rat Spinal Cord Injury Model
Gilho Lee, Heeyoon Park, Hong Suk Park, and Jeong Gu Lee
International Neurourology Journal
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16 :62
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Validation and clinical implication of a quantitative real-time PCR determination of MDR1 gene expression: comparison with
semi-quantitative PCR in 101 patients with acute myeloid leukemia
L.H. Olesen, J.M. Norgaard, N. Pallisgaard, A. Bukh, and P. Hokland
European Journal of Haematology
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70 :296
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Conditioned taste aversion with lipopolysaccharide and peptidoglycan does not activate cytokine gene expression in the spleen
and hypothalamus of mice
Cécile Mormède, Karine Palin, Keith W Kelley, Nathalie Castanon, and Robert Dantzer
Brain, Behavior, and Immunity
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18 :186
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The effect of benzo(a)pyrene on porcine urinary bladder epithelial cells analyzed for the expression of selected genes and
cellular toxicological endpoints
Alexander Wolf, Alexandra Kutz, Sabine Plöttner, Claudia Behm, Herrmann M. Bolt, Wolfram Föllmann, and Jürgen Kuhlmann
Toxicology
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207 :255
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Interleukin-12 but not interleukin-18 is required for immunity to Trypanosoma cruzi in mice
Sebastian E.B Graefe, Thomas Jacobs, Iris Gaworski, Ulricke Klauenberg, Christiane Steeg, and Bernhard Fleischer
Microbes and Infection
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5 :833
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Quantitative real-time PCR: a powerful ally in cancer research
Simone Mocellin, Carlo R. Rossi, Pierluigi Pilati, Donato Nitti, and Francesco M. Marincola
Trends in Molecular Medicine
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9 :189
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Functional up-regulation ofKCNAgene family expression in murine mesenteric resistance artery smooth muscle
S. J. Fountain, A. Cheong, R. Flemming, L. Mair, A. Sivaprasadarao, and D. J. Beech
The Journal of Physiology
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Gene expression patterns in in vitro-produced and somatic nuclear transfer-derived preimplantation bovine embryos: relationship
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C Wrenzycki, D Herrmann, A Lucas-Hahn, E Lemme, K Korsawe, and H Niemann
Animal Reproduction Science
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The influence of proepicardial cells on the osteogenic potential of marrow stromal cells in a three-dimensional tubular scaffold
Mani T. Valarmathi, Michael J. Yost, Richard L. Goodwin, and Jay D. Potts
Biomaterials
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Hypoxia-inducible factor 1α cDNA cloning and its mRNA and protein tissue specific expression in domestic yak (Bos grunniens)
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D.P. Wang, H.G. Li, Y.J. Li, S.C. Guo, J. Yang, D.L. Qi, C. Jin, and X.Q. Zhao
Biochemical and Biophysical Research Communications
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348 :310
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Housekeeping gene selection in poplar plants under Cd-stress: comparative study for real-time PCR normalisation
Brigitta Basa, Ádám Solti, Éva Sárvári, and László Tamás
Functional Plant Biology
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36 :1079
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Nonoxidative ethanol metabolites alter extracellular matrix protein content in rat pancreas
Aurelia Lugea, Ilya Gukovsky, Anna S Gukovskaya, and Stephen J Pandol
Gastroenterology
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125 :1845
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Real-Time Polymerase Chain Reaction
Jochen Wilhelm and Alfred Pingoud
ChemBioChem
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4 :1120
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Detection of stable reference genes for real-time PCR analysis in schizophrenia and bipolar disorder
Gilad Silberberg, Kuti Baruch, and Ruth Navon
Analytical Biochemistry
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391 :91
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Comprehensive Algorithm for Quantitative Real-Time Polymerase Chain Reaction
Sheng Zhao and Russell D. Fernald
Journal of Computational Biology
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12 :1047
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Expression of Cytochromes P450 3A and P-Glycoprotein in Human Large Intestinse in Paired Tumour and Normal Samples
Roberto Canaparo, Anna Nordmark, Niklas Finnström, Stefan Lundgren, Janeric Seidegård, Bengt Jeppsson, Robert J. Edwards,
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Basic & Clinical Pharmacology & Toxicology
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100 :240
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Altered muscle development and expression of the insulin-like growth factor system in growth retarded fetal pigs
R.E. Tilley, C.J. McNeil, C.J. Ashworth, K.R. Page, and H.J. McArdle
Domestic Animal Endocrinology
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32 :167
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Challenges in quantifying microbial gene expression in soil using quantitative reverse transcription real-time PCR
Saleema Saleh-Lakha, Kelly E. Shannon, Claudia Goyer, and Jack T. Trevors
Journal of Microbiological Methods
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85 :239
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A High-Fat Diet Coordinately Downregulates Genes Required for Mitochondrial Oxidative Phosphorylation in Skeletal Muscle
L. M. Sparks, H. Xie, R. A. Koza, R. Mynatt, M. W. Hulver, G. A. Bray, and S. R. Smith
Diabetes
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54 :1926
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Selection of Endogenous Control Genes for Normalization of Gene Expression Analysis after Experimental Brain Trauma in Mice
Serge C. Thal, Sebastian Wyschkon, Dana Pieter, Kristin Engelhard, and Christian Werner
Journal of Neurotrauma
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25 :785
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Responses of Synechocystis sp. PCC 6803 (cyanobacterium) photosystem II to pyrene stress
Jihai Shao, Gongliang Yu, Zhongxing Wu, Xin Peng, and Renhui Li
Journal of Environmental Sciences
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22 :1091
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Modulation of ovine neutrophil function and apoptosis by standardized extracts of Echinacea angustifolia, Butea frondosa and
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Maura Farinacci, Monica Colitti, and Bruno Stefanon
Veterinary Immunology and Immunopathology
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128 :366
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Real-time PCR quantification of Bemisia tabaci (Homoptera: Aleyrodidae) B-biotype remains in predator guts
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Validation of housekeeping genes for studying differential gene expression in the bovine myometrium
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A hexadecylamide derivative of hyaluronan (HYMOVIS®) has superior beneficial effects on human osteoarthritic chondrocytes
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Role of ErbB2 in the prostaglandin E2-induced enhancement of the mitogenic response to epidermal growth factor in cultured
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FGF-2 Acts through an ERK1/2 Intracellular Pathway to Affect Osteoblast Differentiation
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Selection of reliable reference genes for gene expression study in nasopharyngeal carcinoma
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Characterization and transcriptional regulation of thioredoxin reductase 1 on exposure to oxidative stress inducing environmental
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Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology
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Fruitless RNAi knockdown in males interferes with copulation success in Schistocerca gregaria
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Insect Biochemistry and Molecular Biology
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Exposure to chikungunya virus and adult longevity in Aedes aegypti (L.) and Aedes albopictus (Skuse)
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Journal of Vector Ecology
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Cellular Immunology
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TecoflexTM functionalization by curdlan and its effect on protein adsorption and bacterial and tissue cell adhesion
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Identification and phylogenetic analysis on lipopolysaccharide and β-1,3-glucan binding protein (LGBP) of kuruma shrimp Marsupenaeus
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Developmental & Comparative Immunology
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Arabidopsisgene expression changes during cyst nematode parasitism revealed by statistical analyses of microarray expression
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Impact of dietary fat quantity and quality on skeletal muscle fatty acid metabolism in subjects with the metabolic syndrome
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Gold nanoparticle probes for the detection of nucleic acid targets
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Real-time PCR quantification of the in vitro effects of crustacean immunostimulants on gene expression in lobster (Homarus
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The Use of Real-Time Polymerase Chain Reaction in Thoracic Malignancies
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Molecular cloning and characterisation of a pattern recognition molecule, lipopolysaccharide- and β-1,3-glucan binding protein
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Fish & Shellfish Immunology
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Tissue factor-containing microparticles released from mesangial cells in response to high glucose and AGE induce tube formation
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Estrogen inhibits RANKL-stimulated osteoclastic differentiation of human monocytes through estrogen and RANKL-regulated interaction
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Co-expression vs. co-infection using baculovirus expression vectors in insect cell culture: Benefits and drawbacks
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Transformation of real-time PCR fluorescence data to target gene quantity
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Analytical Biochemistry
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High temperature attenuates the gravitropism of inflorescence stems by inducingSHOOT GRAVITROPISM 5alternative splicing inArabidopsis
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New Phytologist
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Laser capture microdissection and analysis of amplified antisense RNA from distinct cell populations of the young and aged
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Cytochrome P450 1C1 complementary DNA cloning, sequence analysis and constitutive expression induced by benzo-a-pyrene in
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Comparative evaluation of measles virus specific TaqMan PCR and conventional PCR using synthetic and natural RNA templates
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A framework and model system to investigate linear system behavior in Escherichia coli
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Inhibition of ileal bile acid transport lowers plasma cholesterol levels by inactivating hepatic farnesoid X receptor and
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Quantification of southern rice black streaked dwarf virus and rice black streaked dwarf virus in the organs of their vector
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Comparing real-time quantitative polymerase chain reaction analysis methods for precision, linearity, and accuracy of estimating
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Analytical Biochemistry
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CCK2 receptor splice variant with intron 4 retention in human gastrointestinal and lung tumours
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The dynamics of gene expression of interleukin-19 and interleukin-20 and their receptors in psoriasis
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British Journal of Dermatology
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Electrical stimulation based on chronaxie reduces atrogin-1 and myoD gene expressions in denervated rat muscle
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Comparison of Real Time Polymerase Chain Reaction Quantification of Changes inhilAandrpoSGene Expression of aSalmonellaTyphimurium
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Molecular and Cellular Endocrinology
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European Journal of Phycology
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Expression changes of dopaminergic system-related genes in PC12 cells induced by manganese, silver, or copper nanoparticles
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Analysis of Metallothionein Brain Gene Expression in Relation to Ethanol Preference in Mice Using Cosegregation and Gene Knockouts
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Reduction in WT1 Gene Expression During Early Treatment Predicts the Outcome in Patients With Acute Myeloid Leukemia
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Higher random oligo concentration improves reverse transcription yield of cDNA from bioptic tissues and quantitative RT-PCR
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Interactions between drugs and sulforaphane modulate the drug metabolism enzymatic system
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Antitumor effects of interleukin-6 (IL-6)/interleukin-6 receptor (IL-6R) signaling pathway inhibition in clear cell carcinoma
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Detection and quantification of a radiation-associated mitochondrial DNA deletion by a nested real-time PCR in human peripheral
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EGFR and EGFRvIII Expression in Primary Breast Cancer and Cell Lines
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Seasonal and Sex-specific mRNA Levels of Key Endocrine Genes in Adult Yellow Perch (Perca flavescens) from Lake Erie
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PPARγ agonists diminish serum VEGF elevation in diet-induced insulin resistant SD rats and ZDF rats
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Mechanisms of Laser-Induced Dissection and Transport of Histologic Specimens
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Evaluation of reference genes in mouse preimplantation embryos for gene expression studies using real-time quantitative RT-PCR
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Light modulates activity and expression of glutamine synthetase isoforms in maize seedling roots
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Archives of Biological Sciences
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Identification and validation of reference genes for normalization of gene expression analysis using qRT-PCR in Helicoverpa
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Evaluation of reference genes for quantitative reverse-transcription polymerase chain reaction normalization in infected tomato
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Molecular Plant Pathology
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Effect of mechanical loading on mRNA levels of common endogenous controls in articular chondrocytes and intervertebral disk
Cynthia R. Lee, Sibylle Grad, Jeffrey J. MacLean, James C. Iatridis, and Mauro Alini
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Identification of Transcripts Involved in Resistance Responses to Leaf Spot Disease Caused byCercosporidium personatumin Peanut
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Optimisation of reverse transcription can improve the sensitivity of RT-PCR for detection of classical swine fever virus
Katarzyna Podgórska and Tomasz Stadejek
Acta Veterinaria Hungarica
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Bifidobacterium bifidum in a rat model of necrotizing enterocolitis: antimicrobial peptide and protein responses
Mark A. Underwood, Anchasa Kananurak, Christine F. Coursodon, Camille K. Adkins-Reick, Hiutung Chu, Stephen H. Bennett, Jan
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Significant overexpression of urokinase-type plasminogen activator in pancreatic adenocarcinoma using real-time quantitative
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Journal of Gastroenterology and Hepatology
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20 :256
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Rapamycin stimulates arginine influx through CAT2 transporters in human endothelial cells
Rossana Visigalli, Amelia Barilli, Ovidio Bussolati, Roberto Sala, Gian C. Gazzola, Alessandro Parolari, Elena Tremoli, Alexandra
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Validation of internal control genes for expression studies: Effects of the neurotrophin BDNF on hippocampal neurons
Ana Rita A. Santos and Carlos B. Duarte
Journal of Neuroscience Research
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Molecular classification of oral cancer by cDNA microarrays identifies overexpressed genes correlated with nodal metastasis
Giles C. Warner, Patricia P. Reis, Igor Jurisica, Mujahid Sultan, Shilpi Arora, Christina Macmillan, Antti A. Makitie, Reidar
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Quantification of chemokines by real-time reverse transcriptase PCR: applications in type 1 diabetes
Lut Overbergh, Conny Gysemans, and Chantal Mathieu
Expert Review of Molecular Diagnostics
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Real-Time Quantitative PCR Measurement of Circulatory Rhodopsin mRNA in Healthy Subjects and Patients with Diabetic Retinopathy
KARIM HAMAOUI, ASIF BUTT, JAKE POWRIE, and R SWAMINATHAN
Annals of the New York Academy of Sciences
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Cloning of chicken 11β-hydroxysteroid dehydrogenase type 1 and its tissue distribution
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The Journal of Steroid Biochemistry and Molecular Biology
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Reference genes in real-time PCR
Bartłomiej Kozera and Marcin Rapacz
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Characterisation of recombinant CHO cell lines by investigation of protein productivities and genetic parameters
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Kunert
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Differentiation of human monocytic cell lines confers susceptibility to Bacillus anthracis lethal toxin
Altaf Kassam, Sandy D. Der, and Jeremy Mogridge
Cellular Microbiology
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Effect of adipose tissue on the sexual dimorphism in metabolic flexibility
Lauren M. Sparks, Magdalena Pasarica, Olga Sereda, Lilian deJonge, Shantele Thomas, Heather Loggins, Hui Xie, John M. Miles,
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Metabolism
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Quantification of Cytokine Gene Expression Using an Economical Real-Time Polymerase Chain Reaction Method Based on SYBRR Green
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Scandinavian Journal of Immunology
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Stability of reference genes for normalization of reverse transcription quantitative real-time PCR (RT-qPCR) data in bovine
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Charlotte Luchsinger, María Elena Arias, Tamara Vargas, Marcos Paredes, Raúl Sánchez, and Ricardo Felmer
Zygote
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Quantitative expression profiling in mouse spinal cord reveals changing relationships among channel and receptor mRNA levels
across postnatal maturation
V.B. Garcia, M.L. Garcia, and D.J. Schulz
Neuroscience
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277 :321
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Assessment of EvaGreen-based quantitative real-time PCR assay for enumeration of the microalgae Heterosigma and Chattonella
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Bum Soo Park, Seung Ho Baek, Jang-Seu Ki, Rose Ann Cattolico, and Myung-Soo Han
Journal of Applied Phycology
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Exploiting Molecular Methods to Explore Endodontic Infections: Part 1—Current Molecular Technologies for Microbiological Diagnosis
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Isothiocyanate–drug interactions in the human adenocarcinoma cell line Caco-2
Katarzyna Lubelska, Irena Misiewicz-Krzemińska, Małgorzata Milczarek, Jolanta Krzysztoń-Russjan, Elżbieta Anuszewska, Karolina
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Molecular and Cellular Biochemistry
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A high efficient protocol for soybean root transformation by Agrobacterium rhizogenes and most stable reference genes for
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Reference genes evaluated for use in infectious pancreatic necrosis virus real-time RT-qPCR assay applied during different
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mRNA expression analysis of the physiological responses to ammonia infusion in rainbow trout
C. Michele Nawata and Chris M. Wood
Journal of Comparative Physiology B
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Development of a quantitative real-time PCR for the detection of canine respiratory coronavirus
Judy A. Mitchell, Harriet Brooks, Kai-Biu Shiu, Joe Brownlie, and Kerstin Erles
Journal of Virological Methods
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Differential expression and regulation of gonadotropins and their receptors in the Japanese eel, Anguilla japonica
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General and Comparative Endocrinology
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Real-time RT-PCR detection of Bovine Viral Diarrhoea virus in whole blood using an external RNA reference
N.J. Young, C.J. Thomas, M.E. Collins, and J. Brownlie
Journal of Virological Methods
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Molecular cloning and characterisation of peroxinectin, a cell adhesion molecule, from the giant freshwater prawn Macrobrachium
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Pei-I. Hsu, Chun-Hung Liu, Deng-Yu Tseng, Pai-Po Lee, and Winton Cheng
Fish & Shellfish Immunology
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Standardisation and reporting for nucleic acid quantification
Jim Huggett and Stephen A. Bustin
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Assessing How Reduced Expression Levels of the Mismatch Repair GenesMLH1,MSH2, andMSH6Affect Repair Efficiency
Minttu Kansikas, Mariann Kasela, Jukka Kantelinen, and Minna Nyström
Human Mutation
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Differentiation of Osteoblasts in Three-Dimensional Culture in Processed Cancellous Bone Matrix: Quantitative Analysis of
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Lars Stangenberg, Dirk J. Schaefer, Olaf Buettner, Jan Ohnolz, Dieter Möbest, Raymund E. Horch, G. Björn Stark, and Ulrich
Kneser
Tissue Engineering
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mRNA of placental origin is readily detectable in maternal plasma
E. K. O. Ng, N. B. Y. Tsui, T. K. Lau, T. N. Leung, R. W. K. Chiu, N. S. Panesar, L. C. W. Lit, K.-W. Chan, and Y. M. D. Lo
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Comparison of the RNA-amplification based methods RT–PCR and NASBA for the detection of circulating tumour cells
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British Journal of Cancer
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A real-time PCR analyzer compatible with high-throughput automated processing of 2-/spl mu/L reactions in glass capillaries
P.N. Ngatchou, M.R. Holl, C.H. Fisher, M.S. Saini, Jianchun Dong, T.T.H. Ren, W.H. Pence, D.L. Cunningham, S.E. Moody, D.A.
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IEEE Transactions on Automation Science and Engineering
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From microRNA target validation to therapy: lessons learned from studies on BDNF
Kärt Varendi, Kert Mätlik, and Jaan-Olle Andressoo
Cellular and Molecular Life Sciences
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PRAME mRNA levels in cases with chronic leukemia: Clinical importance and review of the literature
Semra Paydas, Kahraman Tanriverdi, Sinan Yavuz, and Gulsah Seydaoglu
Leukemia Research
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Determination of an Effective Housekeeping Gene for the Quantification of mRNA for Forensic Applications*
Lilliana I. Moreno, Courtney M. Tate, Erika L. Knott, Jade E. McDaniel, Stephanie S. Rogers, Barbara W. Koons, Mark F. Kavlick,
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Journal of Forensic Sciences
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E. coli Lipopolysaccharide Decreases the Expression of Proteins of Tight Junctions in the Jejunum of Weaning Piglets
Johana Andrea Ciro Galeano, Albeiro López Herrera, and Jaime Eduardo Parra Suescún
Revista Facultad Nacional de Agronomía
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Real-time PCR for simultaneous and quantitative detection of quarantine phytoplasmas from apple proliferation (16SrX) group
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Molecular and Cellular Probes
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Involvement of the PRKCB1 gene in autistic disorder: significant genetic association and reduced neocortical gene expression
C Lintas, R Sacco, K Garbett, K Mirnics, R Militerni, C Bravaccio, P Curatolo, B Manzi, C Schneider, R Melmed, M Elia, T Pascucci,
S Puglisi-Allegra, K-L Reichelt, and A M Persico
Molecular Psychiatry
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14 :705
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Validation of endogenous reference genes for insecticide-induced and developmental expression profiling of Liposcelis bostsrychophila
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Hong-Bo Jiang, Yong-Hua Liu, Pei-An Tang, An-Wei Zhou, and Jin-Jun Wang
Molecular Biology Reports
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37 :1019
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Plasmodium vivax: parasitemia determination by real-time quantitative PCR in Aotus monkeys
Juan Carlos Polanco, Josefa Antonia Rodrı́guez, Vladimir Corredor, and Manuel Alfonso Patarroyo
Experimental Parasitology
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100 :131
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Effects of UV-B in biological and chemical systems: Equipment for wavelength dependence determination
Georgi Kalbin, Shaoshan Li, Helena Olsman, Mikael Pettersson, Magnus Engwall, and Åke Strid
Journal of Biochemical and Biophysical Methods
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65 :1
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Housekeeping genes as internal standards in cancer research
Nico Janssens, Michel Janicot, Tim Perera, and Annette Bakker
Molecular Diagnosis
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8 :107
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Pro-inflammatory and antiviral cytokine expression in vaccinated and unvaccinated horses exposed to equine influenza virus
Michelle Quinlivan, Maura Nelly, Michael Prendergast, Cormac Breathnach, David Horohov, Sean Arkins, Yu-Wei Chiang, Hsien-Jue
Chu, Terry Ng, and Ann Cullinane
Vaccine
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25 :7056
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Concurrent Differentiation of Marrow Stromal Cells to Osteogenic and Vasculogenic Lineages
James A. Henderson, Xuezhong He, and Esmaiel Jabbari
Macromolecular Bioscience
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8 :499
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Selection of reference genes for qPCR in hairy root cultures of peanut
Jose Condori, Cesar Nopo-Olazabal, Giuliana Medrano, and Fabricio Medina-Bolivar
BMC Research Notes
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Genetic variation and activity of mouse Nod2, a susceptibility gene for Crohn’s disease☆☆Sequence data from this article have
been deposited with the GenBank Data Library under Accession Nos. AY160220, AY160221, and AY160229–AY160678.
Yasunori Ogura, Lisa Saab, Felicia F Chen, Adalberto Benito, Naohiro Inohara, and Gabriel Nuñez
Genomics
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81 :369
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Reference gene stability in peripheral blood mononuclear cells determined by qPCR and NanoString
Lars Radke, Christoph Giese, Annika Lubitz, Stephan Hinderlich, Grit Sandig, Michael Hummel, and Marcus Frohme
Microchimica Acta
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181 :1733
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Identification of differentially expressed proteins of Arthrospira (Spirulina) plantensis-YZ under salt-stress conditions
by proteomics and qRT-PCR analysis
Huili Wang, Yanmei Yang, Wei Chen, Li Ding, Peizhen Li, Xiaokai Zhao, Xuedong Wang, Aiying Li, and Qiyu Bao
Proteome Science
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11 :6
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Inflammation markers predict zinc transporter gene expression in women with type 2 diabetes mellitus
Meika Foster, Peter Petocz, and Samir Samman
The Journal of Nutritional Biochemistry
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24 :1655
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Effects of different dietary protein sources on expression of genes related to protein metabolism in growing rats
Junqiu Luo, Daiwen Chen, and Bing Yu
British Journal of Nutrition
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104 :1421
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The tyrosyl-DNA phosphodiesterase gene family in Medicago truncatula Gaertn.: bioinformatic investigation and expression profiles
in response to copper- and PEG-mediated stress
Anca Macovei, Alma Balestrazzi, Massimo Confalonieri, and Daniela Carbonera
Planta
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232 :393
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Validation of adequate endogenous reference genes for the normalisation of qPCR gene expression data in human post mortem
tissue
Antje Koppelkamm, Benedikt Vennemann, Tony Fracasso, Sabine Lutz-Bonengel, Ulrike Schmidt, and Marielle Heinrich
International Journal of Legal Medicine
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124 :371
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A multiplex microsphere bead assay for comparative RNA expression analysis using flow cytometry
Tannin Fuja, Stephen Hou, and Peter Bryant
Journal of Biotechnology
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108 :193
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Cytoskeleton and Vesicle Mobility in Astrocytes
Maja Potokar, Marko Kreft, Lizhen Li, J Daniel Andersson, Tina Pangršič, Helena H. Chowdhury, Milos Pekny, and Robert Zorec
Traffic
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8 :12
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Abrogation of the p38 MAPK α signaling pathway does not promote radioresistance but its activity is required for 5-Fluorouracil-associated
radiosensitivity
Miguel A. de la Cruz-Morcillo, Jesús García-Cano, Laura Arias-González, Elena García-Gil, Francisco Artacho-Cordón, Sandra
Ríos-Arrabal, María L. Valero, Francisco J. Cimas, Leticia Serrano-Oviedo, María V. Villas, Jesús Romero-Fernández, María
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Cancer Letters
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335 :66
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Quantitative detection of T-cell activation markers by real-time PCR in renal transplant rejection and correlation with histopathologic
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Omaima Sabek, M. Tevfik Dorak, Malak Kotb, A. Osama Gaber, and Lillian Gaber
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Heavy Water Reduces GFP Expression in Prokaryotic Cell-Free Assays at the Translation Level While Stimulating Its Transcription
Luisa S. Hohlefelder, Tobias Stögbauer, Madeleine Opitz, Thomas M. Bayerl, and Joachim O. Rädler
BioMed Research International
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2013 :1
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Selection of plastid- and nuclear-encoded reference genes to study the effect of altered endogenous cytokinin content on photosynthesis
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Anne Cortleven, Tony Remans, Wolfram G. Brenner, and Roland Valcke
Photosynthesis Research
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Seasonal changes in CRF-I and urotensin I transcript levels in masu salmon: Correlation with cortisol secretion during spawning
Christian G. Westring, Hironori Ando, Takashi Kitahashi, Ramji Kumar Bhandari, Hiroshi Ueda, Akihisa Urano, Robert M. Dores,
Anna A. Sher, and Phillip B. Danielson
General and Comparative Endocrinology
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155 :126
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Imputing gene expression from selectively reduced probe sets
Yoni Donner, Ting Feng, Christophe Benoist, and Daphne Koller
Nature Methods
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Evaluation of Small Sample cDNA Amplification for Microdissected Airway Expression Profiling in COPD
John V. Gosselink, Shizu Hayashi, Edmond Chau, Joel Cooper, W. M. Elliott, and James C. Hogg
COPD: Journal of Chronic Obstructive Pulmonary Disease
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Seasonal changes in expression of genes encoding five types of gonadotropin-releasing hormone receptors and responses to GnRH
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Aya Jodo, Takashi Kitahashi, Shinya Taniyama, Hiroshi Ueda, Akihisa Urano, and Hironori Ando
General and Comparative Endocrinology
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144 :1
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Development of a Taqman RT-PCR assay for the detection and quantification of negatively stranded RNA of human enteroviruses:
Evidence for false-priming and improvement by tagged RT-PCR
Maël Bessaud, Arnaud Autret, Sophie Jegouic, Jean Balanant, Marie-Line Joffret, and Francis Delpeyroux
Journal of Virological Methods
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Housekeeping gene stability influences the quantification of osteogenic markers during stem cell differentiation to the osteogenic
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Felipe Garcia Quiroz, Olga M. Posada, Daniel Gallego-Perez, Natalia Higuita-Castro, Carlos Sarassa, Derek J. Hansford, Piedad
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Cytotechnology
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A RealTime HIV-1 viral load assay for automated quantitation of HIV-1 RNA in genetically diverse group M subtypes A–H, group
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Ning Tang, Shihai Huang, John Salituro, Wai-Bing Mak, Gavin Cloherty, Julie Johanson, Yu Hong Li, George Schneider, John Robinson,
John Hackett, Priscilla Swanson, and Klara Abravaya
Journal of Virological Methods
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Expression of GnRH genes is elevated in discrete brain loci of chum salmon before initiation of homing behavior and during
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Takeshi A. Onuma, Keita Makino, Hironori Ando, Masatoshi Ban, Masa-aki Fukuwaka, Tomonori Azumaya, and Akihisa Urano
General and Comparative Endocrinology
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PolyA RT-PCR-based quantification of microRNA by using universal TaqMan probe
Xin Luo, Jin Zhang, Huijun Wang, Yingying Du, Lu Yang, Fengyun Zheng, and Duan Ma
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Structure and expression of the barley stem rust resistance gene Rpg1 messenger RNA
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Quantitative PCR study on the mode of action of oligosaccharide elicitors on penicillin G production by Penicillium chrysogenum
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Validation of reference genes for real-time quantitative PCR studies in gene expression levels of Lactobacillus casei Zhang
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Ryutaro Mori, Qingcai Wang, Kathleen D. Danenberg, Jacek K. Pinski, and Peter V. Danenberg
The Prostate
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Thymidylate synthase, dihydropyrimidine dehydrogenase and thymidine phosphorylase expression in colorectal cancer and normal
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Chicken 11β-hydroxysteroid dehydrogenase type 2: Partial cloning and tissue distribution
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Development and application of molecular methods (PCR) for detection of Tasmanian Atlantic salmon reovirus
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Accuracy of a routine real-time PCR assay for the diagnosis of Pneumocystis jirovecii pneumonia
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Introducing undergraduate students to real-time PCR
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DNA polymerase β mRNA and protein expression in Xiphophorus fish
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Development of a single-tube multiplex real-time PCR for detection and identification of five pathogenic targets by using
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The calcineurin inhibitor tacrolimus allows the induction of functional CD4+CD25+ regulatory T cells by rabbit anti-thymocyte
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Gopal Krishna Purohit, Arabinda Mahanty, Bimal Prasanna Mohanty, and Sasmita Mohanty
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Alexander Rebl, Andreas Brietzke, Tom Goldammer, and Hans-Martin Seyfert
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Pancreatic GLP-1 receptor activation is sufficient for incretin control of glucose metabolism in mice
Benjamin J. Lamont, Yazhou Li, Edwin Kwan, Theodore J. Brown, Herbert Gaisano, and Daniel J. Drucker
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Effect of γ-glutamylcysteine ethylester on the levels of c-fos mRNA expression, glutathione and reactive oxygen species formation
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Ezgi Turunc, Lutfiye Kanit, and Ayfer Yalcin
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Reference Gene Selection for Real-Time Quantitative Polymerase Chain Reaction of mRNA Transcript Levels in Chinese Cabbage
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Proceedings of the Nutrition Society
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Decreased eIF3e/Int6 expression causes epithelial-to-mesenchymal transition in breast epithelial cells
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Oncogene
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Cigarette Smoke Stimulates MMP‐1 Production by Human Lung Fibroblasts Through the ERK1/2 Pathway
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A quantitative real-time RT-PCR assay for European eel tyrosine hydroxylase
Finn-Arne Weltzien, Catherine Pasqualini, Philippe Vernier, and Sylvie Dufour
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Chemokine receptor CCR6 expression is regulated by miR-518a-5p in colorectal cancer cells
Claudia Rubie, Bianca Kruse, Vilma Frick, Kathrin Kölsch, Pirus Ghadjar, Mathias Wagner, Friedrich Grässer, Stefan Wagenpfeil,
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Functional effects of a tandem duplication polymorphism in the 5′flanking region of the DRD4 gene
Ursula M. D’Souza, Carsten Russ, Eda Tahir, Jonathan Mill, Peter McGuffin, Philip J. Asherson, and Ian W. Craig
Biological Psychiatry
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Expression of lipogenic enzymes in chickens
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CXC receptor-4 mRNA silencing abrogates CXCL12-induced migration of colorectal cancer cells
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Development and application of multiple internal reference (housekeeper) gene assays for accurate normalisation of canine
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Analyzing abundance of mRNA molecules with a near-infrared fluorescence technique
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Analytical and Bioanalytical Chemistry
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Human organic anion transporting polypeptide 8 promoter is transactivated by the farnesoid X receptor/bile acid receptor
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Developing high throughput quantitative PCR assays for diagnosing Ikeda and otherTheileria orientalistypes common to New Zealand
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DJ Pulford, E Gias, IM Bueno, and AMJ McFadden
New Zealand Veterinary Journal
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Expression dynamics of secreted protease genes inTrichophyton rubruminduced by key host's proteinaceous components
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Medical Mycology
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Functional analysis of a single nucleotide polymorphism in a potential binding site for GATA transcription factors in the
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Veterinary Immunology and Immunopathology
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Characterization of a neuronal cell line expressing native human melanin-concentrating hormone receptor 1 (MCHR1)
Dennis Fry, Brian Dayton, Sevan Brodjian, Christopher Ogiela, Hanna Sidorowicz, Leigh J. Frost, Teresa McNally, Regina M.
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The International Journal of Biochemistry & Cell Biology
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Effects of chronic celecoxib on testicular function in normal and lipopolysaccharide-treated rats
Wendy R. Winnall, Julie A. Muir, Seng Liew, Jon J. Hirst, Sarah J. Meachem, and Mark P. Hedger
International Journal of Andrology
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The significance of minimal residual disease in patients with t(15;17)
David Grimwade
Best Practice & Research Clinical Haematology
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Nitrogen metabolism, acid–base regulation, and molecular responses to ammonia and acid infusions in the spiny dogfish shark
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C. Michele Nawata, Patrick J. Walsh, and Chris M. Wood
Journal of Comparative Physiology B
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MUC1 splice variants in human ocular surface tissues: Possible differences between dry eye patients and normal controls
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Elevated tumour interleukin-1β is associated with systemic inflammation: a marker of reduced survival in gastro-oesophageal
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A quantitative RT-PCR method to determine topoisomerase I mRNA levels in human tissue samples
Karine Durand-Faucher, Hélène Rabinovitch-Chable, Hélène Dzugan, Stéphane Charret, Karine Aubry, Dominique Genet, Sophie Léobon,
Nicole Tubiana-Mathieu, Jeanne Cook-Moreau, Michel Rigaud, and Franck G. Sturtz
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Functional characterization of a stilbene synthase gene using a transient expression system in planta
Jose Condori, Giuliana Medrano, Ganapathy Sivakumar, Vipin Nair, Carole Cramer, and Fabricio Medina-Bolivar
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VEGF System in Dog’s Thymus—Temporal Expression
Fernanda Rodrigues Agreste, Pedro Primo Bombonato, Kaique Nogueira, Anna Clara dos Santos, André Rodrigues da Cunha Barreto-Vianna,
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Open Journal of Veterinary Medicine
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Icariin protects murine chondrocytes from lipopolysaccharide-induced inflammatory responses and extracellular matrix degradation
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Genetic Regulation of Polerovirus and Luteovirus Transmission in the AphidSchizaphis graminum
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Symbiont-mediated changes inLolium arundinaceuminducible defenses: evidence from changes in gene expression and leaf composition
Terrence J. Sullivan, John Rodstrom, Joshua Vandop, James Librizzi, Candace Graham, Christopher L. Schardl, and Thomas L.
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An improved infectivity assay combining cell culture with real-time PCR for rapid quantification of human adenoviruses 41
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Water Research
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The peroxinectin of white shrimp Litopenaeus vannamei is synthesised in the semi-granular and granular cells, and its transcription
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Chun-Hung Liu, Winton Cheng, and Jiann-Chu Chen
Fish & Shellfish Immunology
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Advances in forensic DNA quantification: A review
Steven B. Lee, Bruce McCord, and Eric Buel
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Real-time, fluorescence-based quantitative PCR: a snapshot of current procedures and preferences
Stephen A Bustin
Expert Review of Molecular Diagnostics
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Selection of reference genes for normalization of real-time PCR data in minipig heart failure model and evaluation of TNF-α
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Alessandro Martino, Manuela Cabiati, Manuela Campan, Tommaso Prescimone, Daiana Minocci, Chiara Caselli, Anna Maria Rossi,
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Biochemical and Biophysical Research Communications
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Modified house-keeping gene expression in a rat tail compression loading-induced disc degeneration model
Takashi Yurube, Toru Takada, Hiroaki Hirata, Kenichiro Kakutani, Koichiro Maeno, Zhongying Zhang, Junya Yamamoto, Minoru Doita,
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Comparison of two real-time PCR methods for detection of ostreid herpesvirus 1 in the Pacific oyster Crassostrea gigas
C. Martenot, E. Oden, E. Travaillé, J.P. Malas, and M. Houssin
Journal of Virological Methods
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Proenkephalin expression and enkephalin release are widely observed in non-neuronal tissues
Gerene M. Denning, Laynez W. Ackermann, Thomas J. Barna, John G. Armstrong, Lynn L. Stoll, Neal L. Weintraub, and Eric W.
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Peptides
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Reference genes for qPCR assays in toxic metal and salinity stress in two flatworm model organisms
Michelle Plusquin, Olivier DeGheselle, Ann Cuypers, Ellen Geerdens, Andromeda Van Roten, Tom Artois, and Karen Smeets
Ecotoxicology
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Exercise training does not increase muscle FNDC5 protein or mRNA expression in pigs
John N. Fain, Joseph M. Company, Frank W. Booth, M. Harold Laughlin, Jaume Padilla, Nathan T. Jenkins, Suleiman W. Bahouth,
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Metabolism
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Quantification of product-specific gene expression in biopellets of Aspergillus niger with real-time PCR
Anke Jungebloud, Kathrin Bohle, Yvonne Göcke, Christiana Cordes, Harald Horn, and Dietmar C. Hempel
Enzyme and Microbial Technology
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Molecular diagnosis of respiratory viruses
Eric T Beck and Kelly J Henrickson
Future Microbiology
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Application of RT-PCR in formalin-fixed and paraffin-embedded lung cancer tissues
Fan Zhang, Zhuo-min Wang, Hong-yu Liu, Yun Bai, Sen Wei, Ying Li, Min Wang, Jun Chen, and Qing-hua Zhou
Acta Pharmacologica Sinica
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Multiplex real-time RT-PCR for the simultaneous detection and quantification of transmissible gastroenteritis virus and porcine
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Seong-Hee Kim, In-Joong Kim, Hyun-Mi Pyo, Dong-Seob Tark, Jae-Young Song, and Bang-Hun Hyun
Journal of Virological Methods
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Reference Gene Selection in the Desert Plant Eremosparton songoricum
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International Journal of Molecular Sciences
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Estrogenic environmental chemicals and drugs: Mechanisms for effects on the developing male urogenital system
Julia A. Taylor, Catherine A. Richter, Rachel L. Ruhlen, and Frederick S. vom Saal
The Journal of Steroid Biochemistry and Molecular Biology
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Immune monitoring in whole blood using real-time PCR
Patrick Stordeur, Ling Zhou, Baudouin Byl, Fabian Brohet, Wivine Burny, Donat de Groote, Tom van der Poll, and Michel Goldman
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Reverse transcription-polymerase chain reaction quantitation of steroid receptor mRNA levels
Hai-Bin Wang
Journal of Laboratory and Clinical Medicine
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Genomic analysis of the HER2/TOP2A amplicon in breast cancer and breast cancer cell lines
Edurne Arriola, Caterina Marchio, David SP Tan, Suzanne C Drury, Maryou B Lambros, Rachael Natrajan, Socorro Maria Rodriguez-Pinilla,
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Elucidating the toxicity targets of β-ionone on photosynthetic system of Microcystis aeruginosa NIES-843 (Cyanobacteria)
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Aquatic Toxicology
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Importance of molecular analysis in detecting cervical lymph node metastasis in head and neck squamous cell carcinoma
Mohamed N. Elsheikh, Alessandra Rinaldo, Hiroyuki Hamakawa, Magdy E. Mahfouz, Juan Pablo Rodrigo, Joseph Brennan, Kenneth
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Head & Neck
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The antioxidant and antifibrogenic effects of the glycosaminoglycans hyaluronic acid and chondroitin-4-sulphate in a subchronic
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Giuseppe M. Campo, Angela Avenoso, Salvatore Campo, Angela D’Ascola, Alida M. Ferlazzo, and Alberto Calatroni
Chemico-Biological Interactions
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Molecular cloning and characterisation of copper/zinc superoxide dismutase (Cu,Zn-SOD) from the giant freshwater prawn Macrobrachium
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Winton Cheng, Ying-Hsiu Tung, Chun-Hung Liu, and Jiann-Chu Chen
Fish & Shellfish Immunology
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Quantitative mRNA analysis of adrenergic receptor subtypes in the intestines of healthy dairy cows and dairy cows with cecal
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Barbara Kobel, Ladina Engel, Edgar C. Ontsouka, Hans U. Graber, Jürg W. Blum, Adrian Steiner, and Mireille Meylan
American Journal of Veterinary Research
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An improved method for determination of gene copy numbers in transgenic mice by serial dilution curves obtained by real-time
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Journal of Biochemical and Biophysical Methods
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Noise exposure induces up-regulation of ecto-nucleoside triphosphate diphosphohydrolases 1 and 2 in rat cochlea
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Altered Expression of TGF-β Receptors in Hepatocellular Carcinoma – Effects of a Constitutively Active TGF-β
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Critical evaluation of Cbx7 downregulation in primary colon carcinomas and its clinical significance in Chinese patients
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Evidence-Based Complementary and Alternative Medicine
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Quantitative RT-PCR Analysis of Uncoupling Protein Isoforms in Mouse Brain Cortex: Methodological Optimization and Comparison
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Development of a qRT-PCR assay to determine the relative mRNA expression of two different trypsins in Atlantic cod (Gadus
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Real-time PCR analysis of cytochrome P450 aromatase expression in zebrafish: Gene specific tissue distribution, sex differences,
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Influence of zinc deficiency on the mRNA expression of zinc transporters in adult rats
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Cytokine and acute phase protein gene expression in repeated liver biopsies of dairy cows with a lipopolysaccharide-induced
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Spaceflight Transcriptomes: Unique Responses to a Novel Environment
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Expression profiling identifies chemokine (C-C motif) ligand 18 as an independent prognostic indicator in gastric cancer
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Comparison of Manual and Automatic (MagNA Pure) Isolation Methods of Total RNA from Adipose Tissue
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Molecular Pathways Associated with Stress Resilience and Drug Resistance in the Chronic Mild Stress Rat Model of Depression—a
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Identification and testing of reference genes for gene expression analysis in pollen of Pyrus bretschneideri
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Validation of putative reference genes for qRT-PCR normalization in tissues and blood from pigs infected with Actinobacillus
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Veterinary Immunology and Immunopathology
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Gene expression patterns and dynamics of the colonization of common bean (Phaseolus vulgaris L.) by highly virulent and weakly
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Understanding bovine trypanosomiasis and trypanotolerance: the promise of functional genomics
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Assessment of CMV load in solid organ transplant recipients by pp65 antigenemia and real-time quantitative DNA PCR assay:
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Environmental Microbiology
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A new rapid method for detecting epidermal growth factor receptor mutations in non-small cell lung cancer
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Reduced Incorporation of Fatty Acids Into Triacylglycerol in Myotubes From Obese Individuals With Type 2 Diabetes
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Isolation of outer hair cells from the cochlear sensory epithelium in whole-mount preparation using laser capture microdissection
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Inhibition of Glutamine Synthetase Triggers Apoptosis in Asparaginase-Resistant Cells
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Expression of basic fibroblastic growth factor, syndecan 1 and tumour necrosis factor α in resected acute colonic diverticulitis
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In vivo imaging of Treg cells providing immune privilege to the haematopoietic stem-cell niche
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Developmental Biology
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Expression profiles of glyceraldehyde-3-phosphate dehydrogenase from Clonorchis sinensis: a glycolytic enzyme with plasminogen
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Regulation of endogenous human NPFF2 receptor by neuropeptide FF in SK-N-MC neuroblastoma cell line
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Discordant regulation of hepatic IGF-I mRNA and circulating IGF-I during compensatory growth in a teleost, the hybrid striped
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Matthew E. Picha, Jeffrey T. Silverstein, and Russell J. Borski
General and Comparative Endocrinology
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Pre–B cell colony–enhancing factor inhibits neutrophil apoptosis in experimental inflammation and clinical sepsis
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Gene expression patterns for GDNF and its receptors in the human putamen affected by Parkinson's disease: A real-time PCR
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Molecular and Cellular Endocrinology
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Improving statistical inference on pathogen densities estimated by quantitative molecular methods: malaria gametocytaemia
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9-cis-retinoic acid during in vitro maturation improves development of the bovine oocyte and increases midkine but not IGF-I
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Loss of genomic imprinting of insulin-like growth factor 2 is strongly associated with cellular proliferation in normal hematopoietic
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Experimental Hematology
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Psoriasin (S100A7) is significantly up-regulated in human epithelial skin tumours
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NF-kB and caspases are involved in the hyaluronan and chondroitin-4-sulphate-exerted antioxidant effect in fibroblast cultures
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miR-23a-mediated migration/invasion is rescued by its target, IRS-1, in non-small cell lung cancer cells
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Towards clarification of the inhibitory mechanism of wheat bran leachate on Microcystis aeruginosa NIES-843 (cyanobacteria):
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Assessment of HER-2 Status in Pancreatic Adenocarcinoma
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Determining suitable internal standards for mRNA quantification of increasing cancer progression in human breast cells by
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MLH1 mediates PARP-dependent cell death in response to the methylating agent N-methyl-N-nitrosourea
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Reliability for detecting composition and changes of microbial communities by T-RFLP genetic profiling
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Relative expression of CsZCD gene and apocarotenoid biosynthesis during stigma development in Crocus sativus L.
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Physiology and Molecular Biology of Plants
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Trichoderma harzianum strain SQR-T37 and its bio-organic fertilizer could control Rhizoctonia solani damping-off disease in
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Estradiol down-regulates CD36 expression in human breast cancer cells
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An Italian program of external quality control for quantitative assays based on real-time PCR with Taq-Man™ probes
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Assessment of an internal reference gene in Rhodobacter sphaeroides grown under cobalt exposure
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Quantitation of the mRNA levels of Epo and EpoR in various tissues in the ovine fetus
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Evaluation of a real-time polymerase chain reaction method for the quantification of CYP1B1 gene expression in MCF-7 human
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Characterization of Rabbit Antithymocyte Globulins-Induced CD25+ Regulatory T Cells From Cells of Patients With End-Stage
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VIP reverses the expression profiling of TLR4-stimulated signaling pathway in rheumatoid arthritis synovial fibroblasts
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Array-based comparative genomic hybridization reveals recurrent chromosomal aberrations and Jab1 as a potential target for
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Performance of the automated Abbott RealTime™ HIV-1 assay on a genetically diverse panel of specimens from London: Comparison
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Colorectal Disease
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DNMT1 deficiency triggers mismatch repair defects in human cells through depletion of repair protein levels in a process involving
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Lesch–Nyhan Variant Syndrome: Real-Time RT-PCR for mRNA Quantification in Variable Presentation in Three Affected Family Members
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Quantitative determination of MDR1 mRNA expression in peripheral blood lymphocytes: a possible role of genetic polymorphisms
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Rumen-protected Methionine Improves Early-Lactation Performance of Dairy Cattle Under High Ambient Temperatures
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American Thyroid Association Guide to Investigating Thyroid Hormone Economy and Action in Rodent and Cell Models
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Behavioural and hypothalamic molecular effects of the anti-cancer agent cisplatin in the rat: A model of chemotherapy-related
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Selection of reference genes for quantitative real-time PCR evaluation of chronic erythropoietin treatment effect on the SH-SY5Y
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Central European Journal of Chemistry
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Characterization of rsmC as a potential reference gene for Salmonella Typhimurium gene expression during growth in spent media
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Gene expression of single articular chondrocytes
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Myosin heavy chain mRNA expression correlates higher with muscle protein accretion than growth in Atlantic salmon, Salmo salar
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Comparison of hybridization methods and real-time PCR: their value in animal cell line characterization
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Applied Microbiology and Biotechnology
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Determination of internal controls for quantitative real time RT-PCR analysis of the effect of Edwardsiella tarda infection
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Backbone-free transformation of barrel medic (Medicago truncatula) with a Medicago-derived transfer DNA
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Plant Cell Reports
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An Immunological Fingerprint Differentiates Muscular Lymphatics from Arteries and Veins
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A review of RT-PCR technologies used in veterinary virology and disease control: Sensitive and specific diagnosis of five
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Bernd Hoffmann, Martin Beer, Scott M. Reid, Peter Mertens, Chris A.L. Oura, Piet A. van Rijn, Marek J. Slomka, Jill Banks,
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Veterinary Microbiology
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Broad-spectrum detection and quantitation methods of Soil-borne cereal mosaic virus isolates
Céline Vaïanopoulos, Anne Legrève, Virginie Moreau, and Claude Bragard
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Analysis of gene expression in two large schizophrenia cohorts identifies multiple changes associated with nerve terminal
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In vitro and in vivo quantification of elicitin expression in Phytophthora cinnamomi
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Physiological and Molecular Plant Pathology
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Real-time PCR quantification of human telomerase reverse transcriptase (hTERT) in colorectal cancer
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Further studies on short-term adaptations in the expression of lipogenic genes in broilers
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The effects of aspirin on gastric mucosal integrity, surface hydrophobicity, and prostaglandin metabolism in cyclooxygenase
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Tissue-Type Plasminogen Activator Is Upregulated in Metastatic Breast Cancer Cells Exposed to Insulin-Like Growth Factor—I
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Characterization of reference genes for quantitative real-time PCR analysis in various tissues of Salvia miltiorrhiza
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Molecular cloning and characterization of the matricellular protein Sparc/osteonectin in flatfish, Scophthalmus maximus, and
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Standardization strategy for quantitative PCR in human seminoma and normal testis
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Cloning, tissue and ontogenetic expression of the taurine transporter in the flatfish Senegalese sole (Solea senegalensis)
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Molecular fingerprinting of TGFss-treated embryonic maxillary mesenchymal cells
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Osteoblastic Differentiation Induced by Transcription Factor Decoy against Estrogen Receptor α Gene
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Biochemical and Biophysical Research Communications
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Evidence for qualified quantitative mRNA analysis in formalin-fixed and paraffin-embedded colorectal carcinoma cells and tissue
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Journal of Clinical Laboratory Analysis
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Quantitative high-throughput measurement of gene expression with sub-zeptomole sensitivity by capillary electrophoresis
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Analytical Biochemistry
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The Alzheimer's A -peptide is deposited at sites of complement activation in pathologic deposits associated with aging and
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Validation of a quantitative method for real time PCR kinetics
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Biochemical and Biophysical Research Communications
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Molecular characterization and RNA interference of three midgut aminopeptidase N isozymes from Bacillus thuringiensis-susceptible
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Insect Biochemistry and Molecular Biology
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Routine expression profiling of microarray gene signatures in acute leukaemia by real-time PCR of human bone marrow*
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British Journal of Haematology
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The GeneTrawler®: mapping potential drug targets in human and rat tissues
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Nitric oxide (NO) reversed TNF-α inhibition of trophoblast interaction with endothelial cellular networks
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The inducible nitA promoter provides a powerful molecular switch for transgene expression in Volvox carteri
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Reference Gene Selection for Quantitative PCR Studies in Sheep Neutrophils
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International Journal of Molecular Sciences
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Contribution of cell culture, RNA extraction, and reverse transcription to the measurement error in quantitative reverse transcription
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Jean-Damien Combes, Gaël Grelier, Matthieu Laversanne, Nicolas Voirin, Sylvie Chabaud, René Ecochard, Christine Lasset, and
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Analytical Biochemistry
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Valproic acid induces the glutamate transporter excitatory amino acid transporter-3 in human oligodendroglioma cells
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Cellular response to phase-separated blends of tyrosine-derived polycarbonates
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C-Reactive Protein in Atherosclerotic Lesions
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The American Journal of Pathology
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Expression of the SST receptor 2 in uveal melanoma is not a prognostic marker
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Reference Gene Selection for Quantitative Real-Time RT-PCR Normalization in Iris. lactea var. chinensis Roots under Cadmium,
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miR-27b*, an oxidative stress-responsive microRNA modulates nuclear factor-kB pathway in RAW 264.7 cells
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Novel Mechanisms of Target Cell Death and Survival and of Therapeutic Action of IVIg in Pemphigus
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The American Journal of Pathology
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Histochemistry and Cell Biology
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Unique splicing pattern of the TCF7L2 gene in human pancreatic islets
P. Osmark, O. Hansson, A. Jonsson, T. Rönn, L. Groop, and E. Renström
Diabetologia
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Substantial changes in gene expression level due to the storage temperature and storage duration of human whole blood
M. A. Tanner, L. S. Berk, D. L. Felten, A. D. Blidy, S. L. Bit, and D. W. Ruff
Clinical and Laboratory Haematology
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Reliable determination of training-induced alterations in muscle fiber composition in human skeletal muscle using quantitative
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S. Ellefsen, O. Vikmoen, E. Zacharoff, I. Rauk, G. Slettaløkken, D. Hammarström, T. A. Strand, J. E. Whist, M. Hanestadhaugen,
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Scandinavian Journal of Medicine & Science in Sports
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EGFR and HER3 mRNA expression levels predict distant metastases in locally advanced rectal cancer
Alexandre Ho-Pun-Cheung, Eric Assenat, Caroline Bascoul-Mollevi, Frédéric Bibeau, Florence Boissière-Michot, Dominic Cellier,
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International Journal of Cancer
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Tissue-specific selection of stable reference genes for real-time PCR normalization in an obese rat model
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Molecular cloning and phylogenetic analysis on α2-macroglobulin (α2-M) of white shrimp Litopenaeus vannamei
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Developmental & Comparative Immunology
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Relation of adipose tissue to metabolic flexibility
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Diabetes Research and Clinical Practice
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Housekeeping genes as internal standards in cancer research
Nico Janssens, Michel Janicot, Tim Perera, and Annette Bakker
Molecular Diagnosis
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Short Communication Suitable internal control microRNA genes for measuring miRNA abundance in pig milk during different lactation
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Genetics and Molecular Research
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Monitoring of RNA Clearance in a Novel Plasmid DNA Purification Process
Jason C. Murphy, Michael A. Winters, Matthew P. Watson, John O. Konz, and Sangeetha L. Sagar
Biotechnology Progress
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Identification of HLA-A33-restricted CMV pp65 epitopes as common targets for CD8+ CMV-specific cytotoxic T lymphocytes
Jong-Baeck Lim, Maurizio Provenzano, Oh Hun Kwon, Maria Bettinotti, Lorraine Caruccio, Dirk Nagorsen, and David Stroncek
Experimental Hematology
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Use of a Taqman PCR to determine the response of Mycoplasma haemofelis infection to antibiotic treatment
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Comparison of 5-HT4 and 5-HT7 receptor expression and function in the circular muscle of the human colon
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Mucosal expression of basic fibroblastic growth factor, Syndecan 1 and tumor necrosis factor-alpha in diverticular disease
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Evaluation of housekeeping genes in Listeria monocytogenes as potential internal control references for normalizing mRNA expression
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Quantitative Analysis of ATP Sulfurylase and Selenocysteine Methyltransferase Gene Expression in Different Organs of Tea Plant
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American Journal of Plant Sciences
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Delayed neutrophil apoptosis in sepsis is associated with maintenance of mitochondrial transmembrane potential and reduced
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Ravi Taneja, Jean Parodo, Song Hui Jia, Andras Kapus, Ori D. Rotstein, and John C. Marshall
Critical Care Medicine
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Innate immune activation in neonatal tracheal aspirates suggests endotoxin-driven inflammation
Katheryn E. Nathe, Christy J. Mancuso, Richard Parad, Linda J. Van Marter, Camilia R. Martin, Liat Stoler-Barak, Victoria
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Carmen Hurtado del Pozo, Rosa M. Calvo, Gregorio Vesperinas-García, Javier Gómez-Ambrosi, Gema Frühbeck, Ramón Corripio-Sánchez,
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Establishment of Real-Time TaqMan-Fluorescence Quantitative RT-PCR Assay for Detection and Quantification of Porcine Lipoprotein
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Agricultural Sciences in China
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Expression of tropism-related genes in regenerating skeletal muscle of rats treated with cyclosporin-A
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Drug Discovery Today
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Why the need for qPCR publication guidelines?—The case for MIQE
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Methods
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Fast and discriminative CoSYPS detection system of viable Salmonella spp. and Listeria spp. in carcass swab samples
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The bisphosphonate ibandronate stimulates reverse cholesterol transport out of monocytoid cells by enhanced ABCA1 transcription
Dorothea Strobach and Reinhard L Lorenz
Biochemical and Biophysical Research Communications
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Effect of Sequential Exposure on Infection and Dissemination Rates for West Nile and St. Louis Encephalitis Viruses inCulex
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Arabidopsis gene expression patterns are altered during spaceflight
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Queen pheromone modulates brain dopamine function in worker honey bees
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A simple analytical and experimental procedure for selection of reference genes for reverse-transcription quantitative PCR
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Characterization of the gene Mre11 and evidence of silencing after polyploidization in Triticum
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Dose- and time-dependent effect of bioactive gel-glass ionic-dissolution products on human fetal osteoblast-specific gene
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Gene expression in humans with diabetes and prediabetes: what have we learned about diabetes pathophysiology?
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A review on the electrochemical biosensors for determination of microRNAs
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Differentiation between amplicon polymerization and nonspecific products in SYBR green I real-time polymerase chain reaction
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Cord blood mononuclear cell cytokine responses in relation to maternal house dust mite allergen exposure
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Exercise preconditioning-induced late phase of cardioprotection against exhaustive exercise: possible role of protein kinase
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Molecular cloning and characterization of the myostatin gene in a cultivated variety of bay scallop, Argopecten irradians
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TGFβ1 regulates the inflammatory response during chronic neurodegeneration
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Risk assessment of false-positive quantitative real-time PCR results in food, due to detection of DNA originating from dead
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The antioxidant effect exerted by TGF-1β-stimulated hyaluronan production reduced NF-kB activation and apoptosis in human
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LPS Counter Regulates RNA Expression of Extracellular Proteases and Their Inhibitors in Murine Macrophages
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Sequencing, Transcript Identification, and Quantitative Gene Expression Profiling in the Breast Cancer Loss of Heterozygosity
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Performance of the automated Abbott RealTime™ HIV-1 assay on a genetically diverse panel of specimens from Brazil
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17,20β,21-Trihydroxy-4-pregnen-3-one biosynthesis and 20β-hydroxysteroid dehydrogenase expression during final oocyte maturation
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Comparison of cyclooxygenase-2 and CD44 mRNA expression in colorectal cancer and its relevance for prognosis
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Virchows Archiv
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C6 glioma cells differentiated by retinoic acid overexpress the glutamate transporter excitatory amino acid carrier 1 (EAAC1)
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Validation of reference genes for gene expression studies in peanut by quantitative real-time RT-PCR
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Gene Expression of Inflammation and Bone Healing in Peri-Implant Crevicular Fluid after Placement and Loading of Dental Implants.
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Using real time RT-PCR analysis to determine multiple gene expression patterns during XX and XY mouse fetal gonad development
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Detection and quantitation of equid gammaherpesviruses (EHV-2, EHV-5) in nasal swabs using an accredited standardised quantitative
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Quantitative real-time PCR for cancer detection: the lymphoma case
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Improved normalization of real-time reverse transcriptase polymerase chain reaction data using an external RNA control
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Analytical Biochemistry
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Validation of hisH4 and cox5 reference genes for RT-qPCR analysis of gene expression in Aspergillus flavus under aflatoxin
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Microbiological Research
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Development of fluorescent nanoparticle-labeled lateral flow assay for the detection of nucleic acids
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Estimating amplification efficiency improves multiplex real-time PCR quantification of Bacillus licheniformis and Bacillus
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SELECTION OF INTERNAL CONTROL GENE FOR EXPRESSION STUDIES IN PORPHYRA HAITANENSIS (RHODOPHYTA) AT DIFFERENT LIFE-HISTORY STAGES1
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Using microarray technology to select housekeeping genes in Chinese hamster ovary cells
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Biotechnology and Bioengineering
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Detection and Quantification ofFusarium solanif. sp.glycinesin Soybean Roots with Real-Time Quantitative Polymerase Chain
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Influence of diamond powder particles on human gene expression
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Surface and Coatings Technology
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Micrométastases et cancers bronchiques non à petites cellules
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Differential expression of manganese superoxide dismutase sequence variants in near isogenic lines of wheat during cold acclimation
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DNA repair and cisplatin resistance in non-small-cell lung cancer
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The effect of leptin on luteal angiogenic factors during the luteal phase of the estrous cycle in goats
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Colorimetric detection of eukaryotic gene expression with DNA-derivatized gold nanoparticles
Pedro Baptista, Gonçalo Doria, David Henriques, Eulália Pereira, and Ricardo Franco
Journal of Biotechnology
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Functional genomics of immune responses
Kenneth Christopher, Charlotte M McKee, Thomas F Mueller, and David L Perkins
Immunology and Allergy Clinics of North America
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Monitoring Minimal Residual Disease in Leukemia Using Real-time Quantitative Polymerase Chain Reaction for Wilms Tumor Gene
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Hiroya Tamaki, Machiko Mishima, Manabu Kawakami, Akihiro Tsuboi, Eui Ho Kim, Naoki Hosen, Kazuhiro Ikegame, Masaki Murakami,
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Identification and testing of reference genes for Sesame gene expression analysis by quantitative real-time PCR
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Planta
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An exercise to estimate differential gene expression in human cells
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An Examination of the Role of Feeding Regimens in Regulating Metabolism During the Broiler Breeder Grower Period. 1. Hepatic
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Absolute quantification of gene expression in biomaterials research using real-time PCR
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Morphogenesis and molecular basis on naked seed rice, a novel homeotic mutation of OsMADS1 regulating transcript level of
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Evaluating the temporal stability of stress-activated protein kinase and cytoskeleton gene expression in the Pacific reef
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Analysis of A2a receptor-deficient mice reveals no significant compensatory increases in the expression of A2b, A1, and A3
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Biochemical Pharmacology
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The Impact of Iodine Excess on Thyroid Hormone Biosynthesis and Metabolism in Rats
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Cornea
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Deregulation of gene expression in fetal oocytes exposed to doxorubicin
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Biochemical Pharmacology
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Correlative studies on the effects of obesity, diabetes and hypertension on gene expression in omental adipose tissue of obese
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Changes in cortical and cerebellar bcl-2 mRNA levels in the developing hydrocephalic rat (LEW-HYR) as measured by a real time
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A comparison of molecular methods for monitoring soil nematodes and their use as biological indicators
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European Journal of Soil Biology
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GAPDH, β-actin and β2-microglobulin, as three common reference genes, are not reliable for gene expression studies in equine
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fost12, the Fusarium oxysporum homolog of the transcription factor Ste12, is upregulated during plant infection and required
for virulence
M. Asunción García-Sánchez, Noemí Martín-Rodrigues, Brisa Ramos, José J. de Vega-Bartol, Michael H. Perlin, and José María
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Fungal Genetics and Biology
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Expression of mRNA encoding G protein-coupled receptors involved in congestive heart failure
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Identification of Valid Housekeeping Genes for Real-Time Quantitative PCR Analysis of Collapsed Lung Tissues of Neonatal Somatic
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Cellular Reprogramming
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Physiological and molecular analysis of the interactive effects of feeding and high environmental ammonia on branchial ammonia
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Journal of Comparative Physiology B
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Hepatic gene expression profiling using Genechips in zebrafish exposed to 17α-ethynylestradiol
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Aquatic Toxicology
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Ontogenetic expression of maternal and zygotic genes in Atlantic cod embryos under ambient and thermally stressed conditions
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Analysis of fibroblast growth factor 2 (FGF2) gene transcription and protein distribution in the bovine testis
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Comparison of reference genes for quantitative real-time polymerase chain reaction analysis of gene expression in sugarcane
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Comparison of heat-shock responses between the hydrothermal vent shrimp Rimicaris exoculata and the related coastal shrimp
Palaemonetes varians
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Journal of Experimental Marine Biology and Ecology
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Genes induced by WDS are differentially expressed in two populations of aleppo pine (Pinus halepensis)
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Tree Genetics & Genomes
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Biochemical characterization of trinitrotoluene transforming oxygen-insensitive nitroreductases from Clostridium acetobutylicum
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Archives of Microbiology
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Accurate quantitative RT-PCR for relative expression of Slo splice variants
Sahar F. Mahmoud, Alex L. Bezzerides, Rebecca Riba, Guey-Jen Lai, Peter V. Lovell, Yuko Hara, and David P. McCobb
Journal of Neuroscience Methods
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Differential effect of growth factors on hyaluronan synthase gene expression in fibroblasts exposed to oxidative stress
G. M. Campo, A. Avenoso, S. Campo, A. D’Ascola, A. M. Ferlazzo, and A. Calatroni
Biochemistry (Moscow)
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Analysis of connective tissues by laser capture microdissection and reverse transcriptase-polymerase chain reaction
Robin Jacquet, Jennifer Hillyer, and William J. Landis
Analytical Biochemistry
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Use of induction promoters to regulate hyaluronan synthase and UDP-glucose-6-dehydrogenase ofStreptococcus zooepidemicusexpression
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Kinetic characterisation of primer mismatches in allele-specific PCR: a quantitative assessment
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Biochemical and Biophysical Research Communications
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Reduction of excitotoxicity and associated leukocyte recruitment by a broad-spectrum matrix metalloproteinase inhibitor
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One-step RT-droplet digital PCR: a breakthrough in the quantification of waterborne RNA viruses
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Analytical and Bioanalytical Chemistry
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Distinct effects of 4-nonylphenol and estrogen-17β on expression of estrogen receptor α gene in smolting sockeye salmon
Qiong Luo, Masatoshi Ban, Hironori Ando, Takashi Kitahashi, Ramji Kumar Bhandari, Stephen D. McCormick, and Akihisa Urano
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Developmental expression analysis and immunolocalization of a biogenic amine receptor in Schistosoma mansoni
Fouad El-Shehabi, Jon J. Vermeire, Timothy P. Yoshino, and Paula Ribeiro
Experimental Parasitology
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Evaluation of gametogenic potential of vitrified human umbilical cord Wharton's jelly–derived mesenchymal cells
Maryam Kaviani, Massood Ezzatabadipour, Seyed Noureddin Nematollahi-Mahani, Parvin Salehinejad, Mozhgan Mohammadi, Seyed Mehdi
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Cytotherapy
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Reduced infection in mosquitoes exposed to blood meals containing previously frozen flaviviruses
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Virus Research
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Sex, but not maternal protein or folic acid intake, determines the fatty acid composition of hepatic phospholipids, but not
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G.C. Burdge, J.L. Slater-Jefferies, R.A. Grant, W.-S. Chung, A.L. West, K.A. Lillycrop, M.A. Hanson, and P.C. Calder
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Peptide-based biopolymers in biomedicine and biotechnology
Dominic Chow, Michelle L. Nunalee, Dong Woo Lim, Andrew J. Simnick, and Ashutosh Chilkoti
Materials Science and Engineering: R: Reports
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Investigation of the mechanisms of tissue factor-mediated evasion of tumour cells from cellular cytotoxicity
Chao Li, Mary E. W. Collier, G. Alkisitis Frentzou, John Greenman, and Camille Ettelaie
Cancer Immunology, Immunotherapy
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Gene quantification using real-time quantitative PCR
David G Ginzinger
Experimental Hematology
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30 :503
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Reference gene selection for quantitative real-time reverse-transcriptase PCR in orchardgrass subjected to various abiotic
stresses
Linkai Huang, Haidong Yan, Xiaomei Jiang, Yu Zhang, Xinquan Zhang, Yang Ji, Bing Zeng, Bin Xu, Guohua Yin, Samantha Lee, Yanhong
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Gene
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Comparative expression and characterization of dehydroascorbate reductase cDNA from transformed sesame hairy roots using real-time
RT-PCR
Jae An Chun, Jee Young Seo, Mi Ok Han, Jin Woo Lee, Young Byung Yi, Gun Yong Park, Shin Woo Lee, Shin Chul Bae, Kang Jin Cho,
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Journal of Plant Biology
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Experimental ostreid herpesvirus 1 infection of the Pacific oyster Crassostrea gigas: Kinetics of virus DNA detection by q-PCR
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Virus Research
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PRAME mRNA levels in cases with acute leukemia: Clinical importance and future prospects
Semra Paydas, Kahraman Tanriverdi, Sinan Yavuz, Umut Disel, Fikri Baslamisli, and Refik Burgut
American Journal of Hematology
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Growth hormone substitution increases gene expression of members of the IGF family in cortical bone from women with adult
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T Ueland, P.R Odgren, A Yndestad, K Godang, T Schreiner, S.C Marks, and J Bollerslev
Bone
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Developmental expression and biochemical properties of a beta-1,4-endoglucanase family in the soybean cyst nematode, Heterodera
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Bingli Gao, R. Allen, E. L. Davis, T. J. Baum, and R. S. Hussey
Molecular Plant Pathology
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The transcription analysis of duck enteritis virus UL49.5 gene using real-time quantitative reverse transcription PCR
Meng Lin, Renyong Jia, Mingshu Wang, Xinghong Gao, Dekang Zhu, Shun Chen, Zhongqiong Yin, Yin Wang, Xiaoyue Chen, and Anchun
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Non-invasive fast real-time PCR assay for detection of the enteric parasiteEnteromyxum scophthalmiin cultured turbot (Scophthalmus
maximusL.)
Mercedes Alonso, Fátima C Lago, María Gómez-Reino, Jacobo Fernández Casal, Iris Martín Varela, Juan M Vieites, and Montserrat
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Aquaculture Research
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Genomic effects of once-weekly, intramuscular interferon-β1a treatment after the first dose and on chronic dosing: Relationships
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Bianca Weinstock-Guttman, Kavitha Bhasi, Darlene Badgett, Miriam Tamaño-Blanco, Miranda Minhas, Joan Feichter, Kara Patrick,
Frederick Munschauer, Rohit Bakshi, and Murali Ramanathan
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Assessment of diabetic retinopathy by measuring retina-specific mRNA in blood
A Butt, MS Ahmad, J Powrie, and R Swaminathan
Expert Opinion on Biological Therapy
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Detection and quantitation of Solenopsis invicta virus in fire ants by real-time PCR
Yoshifumi Hashimoto, Steven M. Valles, and Charles A. Strong
Journal of Virological Methods
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Terminal continuation (TC) RNA amplification without second strand synthesis
Melissa J. Alldred, Shaoli Che, and Stephen D. Ginsberg
Journal of Neuroscience Methods
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Porcine Endogenous Retroviruses in Xenotransplantation—Molecular Aspects
Magdalena Kimsa, Barbara Strzalka-Mrozik, Malgorzata Kimsa, Joanna Gola, Peter Nicholson, Krzysztof Lopata, and Urszula Mazurek
Viruses
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Induction of tissue factor expression and release as microparticles in ECV304 cell line by Chlamydia pneumoniae infection
Camille Ettelaie, Mary E.W. Collier, Nicola J. James, and Chao Li
Atherosclerosis
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Relationship Between Heart Damages and HSPs mRNA in Persistent Heat Stressed Broilers
SUN Pei-ming, LIU Yu-tian, ZHAO Yong-gang, BAO En-dong, and WANG Zhi-liang
Agricultural Sciences in China
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The usability of a 15-gene hypoxia classifier as a universal hypoxia profile in various cancer cell types
Brita Singers Sørensen, Anders Knudsen, Catja Foged Wittrup, Steffen Nielsen, Ninna Aggerholm-Pedersen, Morten Busk, Michael
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Real-time reverse transcription PCR for the quantification of the mntH expression of Salmonella enterica as a function of
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Nadine Botteldoorn, Els Van Coillie, Koen Grijspeerdt, Hadewig Werbrouck, Freddy Haesebrouck, Eef Donné, Eva D'Haese, Marc
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Quantitation of CYP1A1 and 1B1 mRNA in polycyclic aromatic hydrocarbon-treated human T-47D and HepG2 cells by a modified bDNA
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Analytical Biochemistry
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Impact of Extrinsic Incubation Temperature and Virus Exposure on Vector Competence ofCulex pipiens quinquefasciatusSay (Diptera:
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Silencing of UBP43 by shRNA enhances the antiviral activity of interferon against hepatitis B virus
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Transcriptional Metabolic Inflexibility in Skeletal Muscle Among Individuals With Increasing Insulin Resistance
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Three conazoles increase hepatic microsomal retinoic acid metabolism and decrease mouse hepatic retinoic acid levels in vivo
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Cyclic mRNA expression of thyrotropin subunits and deiodinases in red drum, Sciaenops ocellatus
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Quantification of vitellogenin–mRNA during maturation and breeding of a burying beetle
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Journal of Insect Physiology
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Quantification of cytokeratin 20, carcinoembryonic antigen and guanylyl cyclase C mRNA levels in lymph nodes may not predict
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Evaluation of potential reference genes for reverse transcription-qPCR studies of physiological responses in Drosophila melanogaster
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Gene expression studies in prostate cancer tissue: which reference gene should be selected for normalization?
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